Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa1g00591 | ATGTTACTTCCGTGTTTGATGGAAATCATGGCGAGGAAGAAACAGAATAACTGTTGGATTCACGTTACAAGAGTAGCAAATGGTCTTTTGTGGAAATGCAATTATTGTGAGTTTACTTTTGAGGGTAGTACTAGTGCTTCAAAAGTTAAAGCACACTTGGGGCTGGATGGCAAAACAGGAAACGTTACACCATGCTCCCATTATCATGCTCATCAACAAGTTCTCAACAATATTGCATCCTCTTCAAGTGAGAACTTGAGCATCCGTGATAGAAGTATCTTTGAGAGTAAGATTAATAACTTAAAAGGAATGGTTATTGATCTAGAATGTGAGGAAAATGATATTGCAAAACAAACTCAATGGTTGGAGTCTCGGGGCAGAAAGCGCAAGCCTGAAGTTGATGCATGGATAAAAGAATTACATGAATTGAATCAAAGAGTGGATGCTATTAATAACTTGGATGACATGAATGAGTTGTTCAAAGATATGAAACGACACAAGGGAGAAAAACCTCTCACTTTGTCCACTGAATTTGTCGGGAAAGAATTAGACTTTAATATCAAGAAAGTGATTCAACTTCTAAATGATGACCAAGTTTTTGTTATCGGTATATATGGAATGGGAGGAGTGGGAAAAACTTTACTTGCTACTCTTGTGGAGAATGAAATAAAAAAGAAAAGAACTTTCAATGATGTGTTTTGGGTCACTGTTTCTCCCAATTTTACCATCTCAAAACTGCAATACGATATCGCAAAACGAATAGGCGTGGAGCTTGATGAAGACAATGAGAGAATTAGAGCAAACAAATTGTCGACGACGTTGGAGACAAAGGAGAAGTCTGTTCTTATTTTAGATGATGTTTGGAGATACATTGATTTGGAAAAGGTGGGTGTTTCTACAAAAGTGAATGGAATTAAAGTGATTCTCACAACGCGTTTGAAACATGTGTGTCAACAGATGGATTGCTTGCCAAGTCATATGATAAAAGTGATACCTCTCTACGATGTAGATGAAGGTTGGGAGTTATTTAAGGTAAAACTTGGACACTACGGAACACCTGCTACACTCTCCCCTGAAATTGAAACTGTTGCAAGAGATATTGTAGATCGGTTTGCGGGTTTGCCGCTTGGAATCAGTGTGATGGCTAGAACCATGAAAGGAATTGATGAGATTGATCAATGGAAACATTCATTGAATAAGCTTAACAAATTGGAAATGGGACAAGAGGTGATAGAAGAAGTTTTCAAGGTATTAAAACGTAGTTATGATAATTTGATGGAAAAAGACTTGCGAAACTGTTTTTTGTATTGTGCACTACTATCTAGTTACGAAGAGAATGACAGAGAAGAAACGATTATGAAACTTGTTGACAATGGACTGATAAATGGGAATAGGTGTTTGCAAGAAATATTCGATGAAGGGCAAACCATATTAGATAAGCTCAGATCCCACAGTTTGATGAGTGGTTTTGATCATTCATTTGAATTTAATTATCGCTTGGTGATAGACACGGCATGTTATATTATGAAAGAAAGTAAGAGAAATGCTATGGTGAAATTAGGGAACGAATTGACAAAGACAAACATCACGCATGAATGGGCCGCTGATTTAGAGTTTGTTCATATGTGGGCTGATGAATCAAATGATATTGAAGAAATTCCAGAGGGCATGTCACCTTATTGTCCGAGGTTGTCCACCTTGATTATAAATCAATTGGCCGTTCAACATATTCCAGAGAGTTTTTTCAAATGTATGAATACCCTAACAATACTCGATCTGTCATATAGTAAAAGACTAGAATGCTTGCCAAATTCTATCAGTAAGATGAAGTCTCTTGTTTCTTTAGTACTAATAGAATGTAATTCACTTAAACATGTGCCGCCATTAGGAGAATTGAAGGTATTGTCAAGATTGGTTCTTTCAAATTGTTCCATTGAAGAACTACCACAAGGTTTGGATAAGCTACAGAATTTGAAATGGCTTGATCTATCTTTCAACAAGAGTTTGAATTTTGAATTAGGGTCTTTGAATTTGACCAAAATACAATACCTTGATCTCCAAGGTACTCGTACAATGATTACTGTCGAAGATATTCAAAGAATGACTGTGTTGGAATGTTTTGGAGGTGCTTTTAACTGCAAACATTACAACCAGTACTTGGAGAAATATCTTGGCACGCGATCTCGGCTCCAAGCATATTATCTCATATTAGGAAATGTATATGGTGAATCAAGAAGTGTTTTGCGGCATGATATTTATTTGAAAGCATTTGATCCAAATGATCCTGAAGTTATGACTATACTATTTAGAGACTGTGGTCATTTCTCCCACATACTACCTAAAGATCTTACATGTTTGAATATAGATAAAAATGATCATTGGGTTTGCTTATGTGATGCTCTCTCATGTAACACTAGTTCTTCTTTGAAGAAAATTGGAGCTTATAATTGCCAACAGCTAGAGAGGTTGTTTTGTTTATCTGATTCTTGTTCCTTTTGCACCAAGATTCACAACCTTGAAATGTTGGAACTTGAGAGTTTGGAAAGGTTAACCGTGATTGACGTTAATGCAAGACAAACTTGGTCATTGGGTGGCATATTCTCTTGTCTAAAAAGTATTTATGTTTTTGAGTGCCATTTGATAGAGAAGTTAATTACACCAAAGTTAGTTGGACAAGTTCAAAATCTGGAAATAATTTCAGTAAGGCGTTGCAATTCAATGAAAGAGATATTAGCGGTGAGCGACGACATCAGACTTCCCAAGCTAAAAAGATTGATATTGGATTATTTACCACAATTGAAGATTGTATGTAAAGGGAGTATATATTGTGGATCTTTACCTCCAGAATTCACCATCTCCAACTGTCCAAGTTTAGAACGATACCCTACAATTAAAAAGTTAAAAAGAAGAAGGGAAAAGGATCCAAATCTGATTATGCCGCGCCTCATCTCACAATCCAGATCATGGTTAACATATGAAGAACTAATCCAAGCTACAAATGGGTCTTCGGAGCAGAATTTGTTGGGAGAAGCTGGATTTGGTTGTGTCTACAAAGGTTTGCTAGATGGAAGAGAAGTAGCTGTAAAACAGCTTAAAATTGATAGTGGACAAGGGGAGCGTGACTTCAGAGCTGAAGTTGAGACTATTAGTCGAGTACATCATCGTCATCTGGTTTCTTTGGTTGGTTACGGTATATTTGAGCATCAAAGATTGCTCGTCTTTGACTTTGCTCTGGTTTCAGATTTCGGGCTTGCGAAATTAGCATTGGATTCAAACACACATGTAACTACACGGATCAGAATGTTGAGGAGGATGGCTTTAATGATTCTCAAAGTAGCTATGGAAGTATGA | 3351 | 0.3674 | MLLPCLMEIMARKKQNNCWIHVTRVANGLLWKCNYCEFTFEGSTSASKVKAHLGLDGKTGNVTPCSHYHAHQQVLNNIASSSSENLSIRDRSIFESKINNLKGMVIDLECEENDIAKQTQWLESRGRKRKPEVDAWIKELHELNQRVDAINNLDDMNELFKDMKRHKGEKPLTLSTEFVGKELDFNIKKVIQLLNDDQVFVIGIYGMGGVGKTLLATLVENEIKKKRTFNDVFWVTVSPNFTISKLQYDIAKRIGVELDEDNERIRANKLSTTLETKEKSVLILDDVWRYIDLEKVGVSTKVNGIKVILTTRLKHVCQQMDCLPSHMIKVIPLYDVDEGWELFKVKLGHYGTPATLSPEIETVARDIVDRFAGLPLGISVMARTMKGIDEIDQWKHSLNKLNKLEMGQEVIEEVFKVLKRSYDNLMEKDLRNCFLYCALLSSYEENDREETIMKLVDNGLINGNRCLQEIFDEGQTILDKLRSHSLMSGFDHSFEFNYRLVIDTACYIMKESKRNAMVKLGNELTKTNITHEWAADLEFVHMWADESNDIEEIPEGMSPYCPRLSTLIINQLAVQHIPESFFKCMNTLTILDLSYSKRLECLPNSISKMKSLVSLVLIECNSLKHVPPLGELKVLSRLVLSNCSIEELPQGLDKLQNLKWLDLSFNKSLNFELGSLNLTKIQYLDLQGTRTMITVEDIQRMTVLECFGGAFNCKHYNQYLEKYLGTRSRLQAYYLILGNVYGESRSVLRHDIYLKAFDPNDPEVMTILFRDCGHFSHILPKDLTCLNIDKNDHWVCLCDALSCNTSSSLKKIGAYNCQQLERLFCLSDSCSFCTKIHNLEMLELESLERLTVIDVNARQTWSLGGIFSCLKSIYVFECHLIEKLITPKLVGQVQNLEIISVRRCNSMKEILAVSDDIRLPKLKRLILDYLPQLKIVCKGSIYCGSLPPEFTISNCPSLERYPTIKKLKRRREKDPNLIMPRLISQSRSWLTYEELIQATNGSSEQNLLGEAGFGCVYKGLLDGREVAVKQLKIDSGQGERDFRAEVETISRVHHRHLVSLVGYGIFEHQRLLVFDFALVSDFGLAKLALDSNTHVTTRIRMLRRMALMILKVAMEV | 1116 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa1g00591 | 1116 | Coils | Coil | 133 | 153 | - | - | |
| Vifa1g00591 | 1116 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 979 | 1076 | - | - | |
| Vifa1g00591 | 1116 | ProSiteProfiles | Protein kinase domain profile. | 1002 | 1116 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Vifa1g00591 | 1116 | Gene3D | Phosphorylase Kinase; domain 1 | 983 | 1076 | - | - | |
| Vifa1g00591 | 1116 | Gene3D | Ribonuclease Inhibitor | 525 | 734 | IPR032675 | - | |
| Vifa1g00591 | 1116 | SUPERFAMILY | Protein kinase-like (PK-like) | 976 | 1083 | IPR011009 | - | |
| Vifa1g00591 | 1116 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 183 | 437 | IPR027417 | - | |
| Vifa1g00591 | 1116 | Pfam | NB-ARC domain | 187 | 424 | IPR002182 | GO:0043531 | |
| Vifa1g00591 | 1116 | Pfam | Protein tyrosine and serine/threonine kinase | 1006 | 1079 | IPR001245 | GO:0004672|GO:0006468 | |
| Vifa1g00591 | 1116 | Gene3D | Ribonuclease Inhibitor | 783 | 974 | IPR032675 | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa1g00591 | - | - | mtr:25497664 | 1077.77 |
Showing 1 to 1 of 1 entries