Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa1g00584 | ATGTTACTTCCGTGTTTGATGGAAATCATGGCGAGGAAGAAACAGAATAACTGTTGGATTCACGTTACAAGAGTAGCAAATGGTCTTTTGTGGAAATGCAATTATTGTGAGTTTACTTTTGAGGGTAGTACTAGTGCTTCAAAAGTTAAAGCACACTTGGGGCTGGATGGCAAAACAGGAAACATTACACCATGCTCTTATCATGCTCACCAACAAGTTCTCAACAATATCGCATCCTCTTCAAGTGAGAACTTGAGCATCCGTGATAGAAGTATCTTTGAGAGTAAGATTAATAACTTAAAAGGAATGGTTATTGATCTAGAATGTGAGGAAAATGATATTGCAAAACAAACTCAATGGTTGGAGTCTCGGGGCAGAAAGCGCAAGCCTGAAGTTGATGCATGGATAAAAGAATTACATGAATTGAAAGAAAGAGTGGATGCTATTAATAACTTGGATGACATGAATGAGTTGTTCAAAGATATGAAACGACACAAGGGAGAAAAACCTCTCACTTTGTCCACTGAATTTGTCGGGAAAGAATTAGACTTTAATATCAAGAAAGTGATTCAACTTCTAAATGATGACCAAGTTTTTGTTATCGGTATATATGGAATGGGAGGAGTGGGAAAAACTTTACTTGCTACTCTTGTGGAGAATGAAATAAAAAAGAAAAGAACTTTCAATGATGTGTTTTGGGTCACTGTTTCTCCCAATTTTACCATCTCAAAACTGCAATACGATATCGCAAAACGAATAGGCGTGGAGCTTGATGAAGACAATGAGAGAATTAGAGCAAACAAATTGTCGACGACGTTGGAGACAAAGGAGAAGTCTGTTCTTATTTTGGATGATGTTTGGAGATACATTGATTTGGAAAAGGTGGGTGTTTCTACAAAAGTGAATGGAATTAAAGTGATTCTCACAACGCGTTTGAAACATGTGTGTCAACAGATGGATTGCTTGCCAAGTCATATGATAAAAGTGATACCTCTCTACGATGTAGATGAAGGTTGGGAGTTATTTAAGGTAAAACTTGGACACTACGGAACACCTGCTACACTCTCCCCTGAAATTGAAACTGTTGCAAGAGATATTGTAGATCGGTTTGCGGGTTTGCCGCTTGGAATCAGTGTGATGGCTAGAACCATGAAAGGAATTGATGAGATTGATCAATGGAAACATTCATTGAATAAACTTAACAAATTGGAAATGGGACAAGAGGTGATAGAAGAAGTTTTCAAGGTATTAAAACGTAGTTATGATAATTTGATGGAAAAAGACTTGCGAAACTGTTTTTTGTATTGTGCACTACTATCTAGTTACGAAGAGAATGACAGAGAAGAAACGATTATGAAACTTGTTGACAATGGACTGATAAATGGGAATAGGTGTTTGCAAGAAATATTCGATGAAGGGCAAACCATATTAGATAAGCTCAGATCCCACAGTTTGATGAGTGGTTTTGATCATTCATTTGAATTTAATTATCGCTTGGTGATAGACACGGCATGTTATATTATGAAAGAAAGTAAGAGAAATGCTATGGTGAAATTAGAGAACGAATTGACAAAGACAAACATCACGCATGAATGGGCCGCTGATTTAGAGTTTGTTCATATGTGGGCTGGTGAATCAAATGATATTGAAGAAATTCCAGAGGGCATGTCACCTTATTGTCCGAGGTTGTCCACCTTGATTATAAATCAATTGGCCGTTCAACATATTCCAGAGAGTTTTTTCAAATGTATGAATACCCTAACAATACTCGATCTGTCATATAGTAAAAGACTAGAATGCTTGCCAAATTCTATCAGTAAGATGAAGTGTCTTGTTTCTTTAGTACTAATAGAATGTAATTCACTTAAACATGTGCCGCCATTAGGAGAATTGAAGGTATTGTCAAGATTGGTTCTTTCAAATTGTTCCATTGAAGAACTACCACAAGGTTTGGATAAGCTACAGAATTTGAAATGGCTTGATCTATCTTTCAACAAGAGTTTGAATTTTGAATTAGGGTCTTTGAATTTGACCAAAATACAATACCTTGATCTCCAAGGTACTCGTACAATGATTACTGTCGAAGATATTCAAAGAATGACTGTGTTGGAATGTTTTGGAGGTGCTTTTAACTGCAAACATTACAACCAGTACTTGGAGAAATATCTTGGCACGCGATCTCGGCTCCAAGCATATTATCTCATATTAGGAAATGTATATGGTGAATCAAGAAGTGTTTTGCGGAATGATATTTATTTGAAAGCATTTGATCCAAATGATCCTGAAGTTATGACTATACTATTTAGAGACTGTGGTCATTTCTCCCACATACTACCTAAAGATCTTACATGTTTGAATATAGATAAAAATGATCATTGGGTTTGCTTATGTGATGCTCTCTCATGTAACACTAGTTCTTCTTTGAAGAAAATTGGAGCTTATAATTGCCAACAGCTAGAGAGGTTGTTTTGTTTATCTGATTCTTGTTCCTTTTGTACCAAGATTCACAACCTTGAAATGTTGGAACTTGAGAGTTTGGAAAGGTTAACCGTCATTGACGTTAATGCAAGACAAACTTGGTCATTGGGTGGCATATTCTCTTGTCTAAAAAGTATTTATGTTTTTGAGTGCCATTTGATAGAGAAGTTAATTACACCAAAGTTAGTTGGACAAGTTCAAAATCTGGAAATAATTTCAGTAAGGCGTTGCAATTCAATGAAAGAGATATTAGCGGTGAGCGACGACATCAGACTTCCCAAGCTAAAAAGATTGATATTGGATTATTTACCACAATTGAAGATTAAAAAGAAGAAGGGAAAAGGATCCAAATCTGATTATGCCGCGCCTCATCTCACAATCCAGGTACCTTCTACAAATGGGTCTTCGGAGCAGAATTTGTTGGGAGAAGCTGGATTTGGTTGTGTCTACAAAGGTTTGCTAGATGGAAGAGAAGTAGCTGTAAAACAGCTTAAAATTGGTAGTGGACAAGGGGAGCGTGAGTTCAGAGCAGAAGTTGAGACTATTAGTCGAGTACATCATCGTAATCTGGTTTCTTTGGTTGGTTACTGTATATCTGTGCATCAAAGATTGCTCGTCTATGACTTTGCTCTGGTTTCAGATTTCAGGCTTGCGAAATTAGTATTGGATTCAAACACACATGTAACTACACGGTTTGTCAATGCCTCTCAGCCAATTGGTGACAAGAGCCTGGTTGAATGGGTTCCAGATTTAAATAGTATCTTATCTTTATTTCAAGGCTCAGATACTGAGGACTTTGAAACTTTGGTGGATCCAAGACTGGAAAAGAACTGCAACAGAAACGAAATGTTTAGAATGATTGAGGCCGCGACAGCCTGCGTGCGTCACTCTTCAGTTAAGAGGCCACAGATGAGTCAGGTTATGAGAGCTTTTGATTCCATGGCCGAGTTTTCGGATCTGAATAACGGAATGAAACCGAGGCAGAGTTCAGAGTTTGATTTTGCACAACAACTTGCACAGACCAGAATGCCGAGAAGGAAGGCTTTTGGAAGCCAAGATAGTTCCAGTTTCTTTAATGATTCTCAAAGTAGCTCTGGAAGTAGGAATCAAGACTCTACAACTATGCTCCCACAAAATAAATCTAGGCCTTGGAACGTTCGAGACGACCCTTTATAG | 3654 | 0.3755 | MLLPCLMEIMARKKQNNCWIHVTRVANGLLWKCNYCEFTFEGSTSASKVKAHLGLDGKTGNITPCSYHAHQQVLNNIASSSSENLSIRDRSIFESKINNLKGMVIDLECEENDIAKQTQWLESRGRKRKPEVDAWIKELHELKERVDAINNLDDMNELFKDMKRHKGEKPLTLSTEFVGKELDFNIKKVIQLLNDDQVFVIGIYGMGGVGKTLLATLVENEIKKKRTFNDVFWVTVSPNFTISKLQYDIAKRIGVELDEDNERIRANKLSTTLETKEKSVLILDDVWRYIDLEKVGVSTKVNGIKVILTTRLKHVCQQMDCLPSHMIKVIPLYDVDEGWELFKVKLGHYGTPATLSPEIETVARDIVDRFAGLPLGISVMARTMKGIDEIDQWKHSLNKLNKLEMGQEVIEEVFKVLKRSYDNLMEKDLRNCFLYCALLSSYEENDREETIMKLVDNGLINGNRCLQEIFDEGQTILDKLRSHSLMSGFDHSFEFNYRLVIDTACYIMKESKRNAMVKLENELTKTNITHEWAADLEFVHMWAGESNDIEEIPEGMSPYCPRLSTLIINQLAVQHIPESFFKCMNTLTILDLSYSKRLECLPNSISKMKCLVSLVLIECNSLKHVPPLGELKVLSRLVLSNCSIEELPQGLDKLQNLKWLDLSFNKSLNFELGSLNLTKIQYLDLQGTRTMITVEDIQRMTVLECFGGAFNCKHYNQYLEKYLGTRSRLQAYYLILGNVYGESRSVLRNDIYLKAFDPNDPEVMTILFRDCGHFSHILPKDLTCLNIDKNDHWVCLCDALSCNTSSSLKKIGAYNCQQLERLFCLSDSCSFCTKIHNLEMLELESLERLTVIDVNARQTWSLGGIFSCLKSIYVFECHLIEKLITPKLVGQVQNLEIISVRRCNSMKEILAVSDDIRLPKLKRLILDYLPQLKIKKKKGKGSKSDYAAPHLTIQVPSTNGSSEQNLLGEAGFGCVYKGLLDGREVAVKQLKIGSGQGEREFRAEVETISRVHHRNLVSLVGYCISVHQRLLVYDFALVSDFRLAKLVLDSNTHVTTRFVNASQPIGDKSLVEWVPDLNSILSLFQGSDTEDFETLVDPRLEKNCNRNEMFRMIEAATACVRHSSVKRPQMSQVMRAFDSMAEFSDLNNGMKPRQSSEFDFAQQLAQTRMPRRKAFGSQDSSSFFNDSQSSSGSRNQDSTTMLPQNKSRPWNVRDDPL | 1217 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa1g00584 | 1217 | Gene3D | - | 334 | 425 | IPR042197 | - | |
| Vifa1g00584 | 1217 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1057 | 1157 | - | - | |
| Vifa1g00584 | 1217 | Gene3D | Phosphorylase Kinase; domain 1 | 937 | 1035 | - | - | |
| Vifa1g00584 | 1217 | Gene3D | Ribonuclease Inhibitor | 521 | 733 | IPR032675 | - | |
| Vifa1g00584 | 1217 | Coils | Coil | 509 | 529 | - | - | |
| Vifa1g00584 | 1217 | ProSiteProfiles | Protein kinase domain profile. | 961 | 1217 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Vifa1g00584 | 1217 | Pfam | NB-ARC domain | 186 | 423 | IPR002182 | GO:0043531 | |
| Vifa1g00584 | 1217 | SUPERFAMILY | Protein kinase-like (PK-like) | 951 | 1137 | IPR011009 | - | |
| Vifa1g00584 | 1217 | Gene3D | Ribonuclease Inhibitor | 778 | 936 | IPR032675 | - | |
| Vifa1g00584 | 1217 | PRINTS | Disease resistance protein signature | 652 | 668 | - | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa1g00584 | - | - | mtr:25497664 | 1030.39 |
Showing 1 to 1 of 1 entries