Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00583 ATGGAAGCACCTCGCCGGGATCTTCATAACTCGCCGGAATCTTCACATTGCCGCCGTTCTCCGTCATCTCCAATCGGGAAAATTCTAATCATGCCTCCGCAAAGACAAGAGCTGTGGTGGAGACATGTCATTAGAGTCGCAAATGAACAAGTTCACAACAGTACTGCACTGCTTAATTCAGATGCAGAAATGCCAAGGTGCCTTTGTAATTTCGGACAACCGTTCATGCGCACTTTGGGTGAAGATTCACAGAGTATACTCCCTCTACACACTGTATTCAATTGCGTTGATTCCATGGCCGAGTTTTTGGATCTGAATAGTGGAATGAAACCGGAGCAGAGTTCAATGTTTGATTCTGCGCAACAATCTACACGTATCAAAATGTTTAGGAGGATGGAGTTTGGAAGCCAAGATAGTACCAGTGTCTTCAATAATACTCTTTGTCATATGGCTCAGGACACGTTAACATGTTAG 474 0.443 MEAPRRDLHNSPESSHCRRSPSSPIGKILIMPPQRQELWWRHVIRVANEQVHNSTALLNSDAEMPRCLCNFGQPFMRTLGEDSQSILPLHTVFNCVDSMAEFLDLNSGMKPEQSSMFDSAQQSTRIKMFRRMEFGSQDSTSVFNNTLCHMAQDTLTC 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00583 157 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00583 Vifa-Chr1 99002144 99006127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00583 92 143 Trihelix Transcription Factor Family AT5G38560 51.923 5.20e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00583 - - gmx:100790988 77.7962