Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00534 ATGTTGCATGGAGTTCAAATGGACAGTAGTCATGTGGAAGTAAATGATCAAGAGCCCGAAACACCACAATTTTGCACTCAAGCTCAAGATGGGTTGGAAACAATCAACCTTGGTGAAGAAGTCAAAACTACATCGGTTATGAATATGTCGAAAATAAGATTTCAACCAAAGGAGGATGAACTTCTCATTCAATCATGGCTCAACATTTCAAGGGATCCAATTGTTGGGGTTGATCAAAAGGGAGATAGTTTCTGGAAGAGGATTGGTGAAGCTTATAACAACCACCGCCACAAGAATTTTCCCGAGAGGAATCCGTTGGCACTAAAAGGTCGATGGCATAAAAAAATTAATCCTTCTGTACAAAAGTTTGTTGGGTGCTACAAACAAGCTGTCGCTATAAAGAAAAGTGGTAGCTCTGAGAGTGACATCGTTTCGGCGGCATGTGATATTTATTACCAAGACGGACATGAAAAGTTCACATTTCAGAGTGCATGGAAATTATTGAGAGATGAACCCAAATGGCTTGGAGGTTCATCGGAACCTTCTGCAAAAAGAACAAAGAGTTCGGCTTCTGGAGCATATTCAACATCTTCTAACCCAACAACACCAACAAGCGAATACAATCCACCATCACCGACTTTGTTACATCATCCAATCGGTAATAAGGCGGCCAAAAGGAAGCAAAAAGAAAAGTTTGTGGAAAAACCTACTCCTAAATTTGATGCTATGAAAGATGACTTAAACAAAAAAGTTGAATTAATGTCGGGGTTTGCATGTGATTATGCACGTATTGAGAGTGAAAAAATGGAGATAGAGAGGAAAAGGGTTGATGCTGAGTTGCATGCGGCAAAGATTAATGATTTGCAAATACTCTCGAAGGATACATCAAATATGACACCAAGACAACTACAAGATCACAAATTTTTGTGCGGTGTAATTAGAGATAGATATGGAGTTAAATGA 963 0.3915 MLHGVQMDSSHVEVNDQEPETPQFCTQAQDGLETINLGEEVKTTSVMNMSKIRFQPKEDELLIQSWLNISRDPIVGVDQKGDSFWKRIGEAYNNHRHKNFPERNPLALKGRWHKKINPSVQKFVGCYKQAVAIKKSGSSESDIVSAACDIYYQDGHEKFTFQSAWKLLRDEPKWLGGSSEPSAKRTKSSASGAYSTSSNPTTPTSEYNPPSPTLLHHPIGNKAAKRKQKEKFVEKPTPKFDAMKDDLNKKVELMSGFACDYARIESEKMEIERKRVDAELHAAKINDLQILSKDTSNMTPRQLQDHKFLCGVIRDRYGVK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00534 320 Coils Coil 261 281 - -
Vifa1g00534 320 MobiDBLite consensus disorder prediction 1 21 - -
Vifa1g00534 320 PANTHER - 42 310 - -
Vifa1g00534 320 MobiDBLite consensus disorder prediction 181 211 - -
Vifa1g00534 320 MobiDBLite consensus disorder prediction 176 232 - -
Vifa1g00534 320 Pfam No apical meristem-associated C-terminal domain 158 302 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00534 Vifa-Chr1 89769297 89770259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00534 41 229 Glutathione S-transferase Gene Family AT5G41240 36.139 9.73e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00534 - - mtr:11446189 431.795