Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00528 ATGGCTTATTCAAACTCAGTTGTCTTCAAATTCTCAATTATCTTAATTGTAATATTTGCATTTAAGATTAGAGACATCGCAACTTTTAGTATAAATCCTAGGGTTACTGTTACAATTAAGGATGTTATATCAGGATCGATAAGACTAACTGTTCATTGTAAATCTAAAGATGACGATCTTGGATTTCATACACTGCAATCCGGACAAATTTATAGGTTTTCATTCAAACCAAGTGCTATAATAACGATTAATACTTTATTCTTTTGCGCTTTTACATGGCCAGGAAGCCCCTATCGTCACTATCTTGACGTTTACGATCAAAAGCGAAACACTTGCACAAATTGCTATTGGTTAATTAGTCAACAAGGTGGTTGTTTGAATGGTCAATGTAGAGTTTGGCAACGTATTGAATCAATTGATGCAAAAAACAGTACATCCAAGATGTAG 447 0.3356 MAYSNSVVFKFSIILIVIFAFKIRDIATFSINPRVTVTIKDVISGSIRLTVHCKSKDDDLGFHTLQSGQIYRFSFKPSAIITINTLFFCAFTWPGSPYRHYLDVYDQKRNTCTNCYWLISQQGGCLNGQCRVWQRIESIDAKNSTSKM 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00528 148 Pfam Plant self-incompatibility protein S1 36 128 IPR010264 -
Vifa1g00528 148 PANTHER - 34 127 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00528 Vifa-Chr1 89165989 89166435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00528 32 125 Carbohydrate Esterase AT3G16970 39.000 4.97e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00528 - - mtr:11416878 162.155