Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00487 ATGGGTCCTAGCAATTCCAGCATGAATAATAATGTATCAACATCACAAGCAGAACTAGCAAGTTTAAAAAACTTGAGGTCTCCAGTTCCTTACCTCTTTGGTGGTTTAGCTATAATGTGCGGAGTCATCGCGATAGCATTACTCATACTCGCATGTTCTTTTCGAAGATATTCATCTTCTTTCTCGTCTAATGACGAAGAAAAATCGTCTGAAATGTGTGTTATGGATGTGGATCAGGTGAGTCTGGAGCCAAAGATTGTTGTGGTAATGCCCGGAGAGAATAATCCAACGTATTTGGCTATGCCAGTTTCGTCGGTAAGTCATATTGATCAACAAACTCTTCAGAATTAA 351 0.396 MGPSNSSMNNNVSTSQAELASLKNLRSPVPYLFGGLAIMCGVIAIALLILACSFRRYSSSFSSNDEEKSSEMCVMDVDQVSLEPKIVVVMPGENNPTYLAMPVSSVSHIDQQTLQN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00487 116 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 10 107 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00487 Vifa-Chr1 80636020 80636370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00487 4 103 Glutamine Dumper (GDU) Family AT4G31730 45.192 5.36e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00487 - - tpra:123892113 123.635