Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00417 ATGGGAGCGGTAACGTCGTCGATGGCGGCGAAGTTCGCCTTCTTCCCGCCGAATCCACCGTCGTACGGCATCGGAGTCGACGAAGCTACCGGAAAAAACAAGATCACCGGAGTTTCCACCAGAGAAAACGTTGACGTTTTGAAGCTTTGTACCAAAAGAGCGAATAGCATCGTTGCTTTGTATATAAAGAACACTGCAGCTTCTCTTACGGTTCTGTATTCTCATGGAAACGCCGCTGATCTGGGTCAGATGTACGAGTTGTTCAGTGAACTCAGTATTCACCTCCGAGTCAACCTCTTGTGTTATGACTATTCTGGGTATGGTCAATCTTCTGGGAAGCCTAGTGAACAGAACACTTATGCAGATATAGAAGCTGCTTATAAATGTTTGGTAGAAATGTATGGAGCCAAAGAAGAAGATATTATTCTGTATGGACAATCTGTTGGTAGTGGTCCTACTACAGATTTAGCTTCCCGTTTACCCAATCTTCGAGCTGTCATTCTCCATAGTCCCATCCTATCTGGCCTTCGAGTAATGTATCCTGTGAAGAGGACTTACTGGTTCGACATTTATAAGAACATCGATAAAATTCCTTTGGTCAATTGTCCAGTTCTGGTAATTCATGGAACAGCTGATGATGTAGTAGATTGCTCCCACGGGAAGCAACTTTGGGAACATTGTAAAGAAAAGTACGAACCGTTATGGGTTAAAGGAGGAAATCATTGTGACCTAGAACATTACCCTCAATATATAAAGCACCTAAAGAAATTTATCGCAGCTATTGAGAAATCCTCACGTCAAAGAACCGAACCTGGACCAGCTCCTGAACAACTAGACATACCTCGGGACAGCAAAGATTTCAGGGAGAAACCTAGAACTAGCATGGATCTAAGGGAGAACTCTAGACGAAGTATTGAATTCAAAGAAAAGTCTAGAATAAGCACGGACCTTAAAGAAAAATCAAGATCTGGAGTGGATAAAAGAGATAAGTCAAGAAAGAGTGTAGACCGCACCGACAAAGTAAATAATGGAGCAGAGATTCCTGAGAAAGCTAGAAATAGCATTGACCGTTTTGGGGGGATGGTGAGATCGGTTGGATTATGCAATATTGATTGTTTCAGACCCTCGGCAACTCATGCATAA 1143 0.4278 MGAVTSSMAAKFAFFPPNPPSYGIGVDEATGKNKITGVSTRENVDVLKLCTKRANSIVALYIKNTAASLTVLYSHGNAADLGQMYELFSELSIHLRVNLLCYDYSGYGQSSGKPSEQNTYADIEAAYKCLVEMYGAKEEDIILYGQSVGSGPTTDLASRLPNLRAVILHSPILSGLRVMYPVKRTYWFDIYKNIDKIPLVNCPVLVIHGTADDVVDCSHGKQLWEHCKEKYEPLWVKGGNHCDLEHYPQYIKHLKKFIAAIEKSSRQRTEPGPAPEQLDIPRDSKDFREKPRTSMDLRENSRRSIEFKEKSRISTDLKEKSRSGVDKRDKSRKSVDRTDKVNNGAEIPEKARNSIDRFGGMVRSVGLCNIDCFRPSATHA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00417 380 MobiDBLite consensus disorder prediction 263 348 - -
Vifa1g00417 380 Pfam Serine aminopeptidase, S33 70 174 IPR022742 -
Vifa1g00417 380 Gene3D alpha/beta hydrolase 48 263 IPR029058 -
Vifa1g00417 380 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 6 263 - -
Vifa1g00417 380 MobiDBLite consensus disorder prediction 279 348 - -
Vifa1g00417 380 SUPERFAMILY alpha/beta-Hydrolases 70 260 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00417 Vifa-Chr1 66201900 66206104 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00417 K01076 - gmx:100780341 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00417 1 66201900 66206104 Vifa1g00417 1 66201900 66206104 ECH
Vifa1g00417 1 66201900 66206104 Vifa1g00417 1 66201900 66206104 PCT
Vifa1g00417 1 66201900 66206104 Vifa1g02675 1 420405333 420406070 PCT