Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00350 ATGTTTAGAGAGGTTCAGAGCCAGTTGGGAAATACAATGAAATCTCCCAATAGTATGATTTTTGATGAGCTTCTAAAAACTGTGATTTCAGATGAAAGTGACCAACTTATGCAAAACCATCCTTCATTTCATCATAATAGTAATTCATCATTTTTTTCTGCGAGCACTAGTGATAGTTTGAATAACAACGAGATATGGAGTGAGATTAACCAACAAAAACATGCAAAAGATAATAATGTTCATTTTGATGAATCAAATTTGGCCATGGCTGCTTCACAGTCACAACATTGGTTACCATTAGAACTGCAAATGCCGGTGTCAATTCCAATGCAAATGCCTTCTATCCAACTCGAGCAACAACGGAATCATCGTCTACAAAATCAACCGATATTAGGGTTATGTCCAAATTTCAATGCTGCACAATCGGTTTATGAGAATAAACCGATGGAGATCGATTACTCCGAAAAATTACTGAATATGTCAATGCCATTATCATCTACATGTTTAGATTCAAATGAAATTGTTGATGCTGCTGCTGGTGTCGGCGTTGGAGTTGAGATGATTGAAAAAACTGTTGAAAGAAAACAGAAGAGAATGGCGAAGAACCGTGAATCTGCCGCAAAATCTAGGGCAAAGAAACAGGTAACTAAGACTCCTCTTTTGGTATCATGTTATTCTAGCCGATCAGTTCCTATGTCTTCCATTCCTCTCACTCATGTCAACTTTGTTCCTGTGACACTTACCAGTTTTGTTTCTCTTAGCAGTCTTAACTTTGTGTCTATTACCTCTACCAATTCTCCTATTTTTGCCCCTATTAATTCTACAAATCCTTCTATCTTAACACCTTCTAACAATGCTTCCCCTGCTTCTGAAAATTCTTCTTTTCATTCTCCCATCACTCCCTCTTCTCTCAGCCCTATTACATCTGATATTGCAGAAGCTAGCAACATTTCTCTCAATACGATCAATATATGTTAG 978 0.3722 MFREVQSQLGNTMKSPNSMIFDELLKTVISDESDQLMQNHPSFHHNSNSSFFSASTSDSLNNNEIWSEINQQKHAKDNNVHFDESNLAMAASQSQHWLPLELQMPVSIPMQMPSIQLEQQRNHRLQNQPILGLCPNFNAAQSVYENKPMEIDYSEKLLNMSMPLSSTCLDSNEIVDAAAGVGVGVEMIEKTVERKQKRMAKNRESAAKSRAKKQVTKTPLLVSCYSSRSVPMSSIPLTHVNFVPVTLTSFVSLSSLNFVSITSTNSPIFAPINSTNPSILTPSNNASPASENSSFHSPITPSSLSPITSDIAEASNISLNTINIC 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00350 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 197 212 IPR004827 GO:0003700|GO:0006355
Vifa1g00350 325 MobiDBLite consensus disorder prediction 280 301 - -
Vifa1g00350 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 215 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00350 Vifa-Chr1 56156270 56159734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00350 183 214 bZIP Transcription Factor Family AT2G41070 75.000 1.01e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00350 K14432 - qsu:112035337 103.99