Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00335 ATGAAGAAAAATATATCAAATACAACGCGATTCAATATTGAAGACGGAGCGAAGAACATTTCCATATGTAATAGTCCTGAGAAAATGCAAAGAAAACTCATATTCGATGTTGTCAAAGACATTTTACCAGAAATAAATCTAAAAGGGAAGAAGCTTTTCGAAGAGCTACGTATAGAAATAGACGAGTTACAACCTCGAAACAGGAATATCAGGTGTGATCACGAGGATAAGAATTCAATAAGTCTATTGTGCAGTGATTTAAAGGATCATAACACGGTTTGGACTAACTGTTGTAGCGAGAAACCGAATAGCGTGTTGGATATCGAACCATTGATCTTTAGAGACTCGATAACTGAAGTTTATGAGAGATGA 372 0.3548 MKKNISNTTRFNIEDGAKNISICNSPEKMQRKLIFDVVKDILPEINLKGKKLFEELRIEIDELQPRNRNIRCDHEDKNSISLLCSDLKDHNTVWTNCCSEKPNSVLDIEPLIFRDSITEVYER 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00335 123 PANTHER LONGIFOLIA PROTEIN 22 120 IPR033334 GO:0051513
Vifa1g00335 123 Pfam Domain of unknown function (DUF4378) 23 117 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00335 Vifa-Chr1 53681499 53681870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00335 27 120 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 35.833 7.15e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00335 - - psat:127128662 175.252