Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00323 ATGGGAAACCTCTGCGCTCTCCTCAAACCAACCCACCACCAACAATCACCATCTTCATCCAACAAACTTCCTTCAACAAGCCGCAGAGAGAAGAAAAGGCTCGACGATGCATCCATTCGTGAACAAGCTATAGCTGCTGCTTTACTCTACAAACACCATCAGCAGAATCTGCAATTTGATCGCTCCAGTTCGTTACGATACCCTAATGGACCTTCCAAGAAGAATCATGGCACTAATACTTTGCCGCGGAGTTCCAGTTCTAGAGCTAGATCACTCACTGATCCTCTTCTTCATCCTCATCAGCTTCTAAATCAGGGTGTAAAGGTTGATGATCTTGAGACCAATCATTTTGTCCTTGTCCATGGAGGTGGTTTCGGGGCCTGGTGTTGGTATAAAACTATCGCACTTCTTGAAGAAAGTGGTTATAAAGTATCTGCCATAGATTTAGCTGGTTCTGGAGTTCATTCATTTGATACTAACAACATTACAAGTCTGTTTCAATATGTTAAGCCTCTTACCGATTTCCTTGAAAAACTTCCCGAAAGCCAAAAGGTGATCTTGGTTGGACATGATTTTGGTGGCGCATGTATATCGTATGCAATGGAGTTGTTTCCGCTTAAGGTTTCCAAAGCCGTCTTTATTGCTGCAGCAATGCCGACTAATGGACAAAGTACTCTCGATATCATTTCAAAACAGGCAGGATCAAACGATCTCATGCCACAAGCTCAAATTTTTTTGTATGCAAACGGGAATGATCGTCCTCCCACCGCCTTTGATCTGGACAAATCATTATTAAGAGATTTGTTATTCAATCAAAGTCCCGCCAAAGACGTTGCATTAGCATCTGTTTCGATGAGGTCGGTACCATTCGCACCGGTTTTAGAGAAACTTTCCCTTTCAGACACGAAATACAGAAGCGTTAGGCGGTTTTATATAAAAACTCTTGAAGACAATGCCATACCAATTTCACTTCAAGAAAACATGATAAATGCAGGCCCACCAGAAAAGGTTTTCCATCTGAAGGGTGCTGATCATTCTCCTTTCTTCTCAAAGCCTCAAGCTTTGCATAAGTTATTGGTAGAAATCTCAACAATCATTTGA 1101 0.4196 MGNLCALLKPTHHQQSPSSSNKLPSTSRREKKRLDDASIREQAIAAALLYKHHQQNLQFDRSSSLRYPNGPSKKNHGTNTLPRSSSSRARSLTDPLLHPHQLLNQGVKVDDLETNHFVLVHGGGFGAWCWYKTIALLEESGYKVSAIDLAGSGVHSFDTNNITSLFQYVKPLTDFLEKLPESQKVILVGHDFGGACISYAMELFPLKVSKAVFIAAAMPTNGQSTLDIISKQAGSNDLMPQAQIFLYANGNDRPPTAFDLDKSLLRDLLFNQSPAKDVALASVSMRSVPFAPVLEKLSLSDTKYRSVRRFYIKTLEDNAIPISLQENMINAGPPEKVFHLKGADHSPFFSKPQALHKLLVEISTII 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00323 366 Gene3D alpha/beta hydrolase 109 364 IPR029058 -
Vifa1g00323 366 MobiDBLite consensus disorder prediction 59 91 - -
Vifa1g00323 366 MobiDBLite consensus disorder prediction 1 36 - -
Vifa1g00323 366 FunFam putative methylesterase 11, chloroplastic 111 365 - -
Vifa1g00323 366 MobiDBLite consensus disorder prediction 9 24 - -
Vifa1g00323 366 PANTHER METHYLESTERASE FAMILY MEMBER 114 363 IPR045889 -
Vifa1g00323 366 SUPERFAMILY alpha/beta-Hydrolases 116 361 IPR029058 -
Vifa1g00323 366 Pfam Alpha/beta hydrolase family 117 355 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00323 Vifa-Chr1 51894727 51897783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00323 33 188 Miscellaneous Gene Families AT3G29770 65.432 2.57e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00323 - - gmx:100818550 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00323 1 51894727 51897783 Vifa1g00323 1 51894727 51897783 ECH