Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00312 ATGAACCCCAACAACCATAACTCTTGGTCCAATTTCATGCAAAATTGTGGCATTCCATCATTTATCCCAAATCAACAATTTTGCACTCAAGCTCAAGATGGGTTAGAAACAATCAACCTTGGTGAAGAAGTCAAAACTACATCGGTTATGAATATGTCGAAAATAAGATTTCAACCAAAGGAGGATGAACTTCTCATTCAATCATGGCTCAACATTTCAAGGGATCCAATTGTTGGGGTTGATCAAAAGGGAGATAGTTTCTGGAAGAGGATTGGTGAAGCTTATAATAACCACCGCCACAAGAATTTTCCCGAGAGGAATCCGTTGGCACTAAAAGGTCGATGGCATAAAAAAATTAATCCTTCTGTACAAAAGTTTGTTGGGTGCTACAAACAAGCTGTCGCTATAAAGAAAAGTGGTAGCTCTGAGAGTGACATCGTTTCGGCGGCATGTGATATTTATTACCAAGACGGACATGAAAAGTTCACATTTCAGAGTGCATGGAAATTATTGAGAGATGAACCCAAATGGCTTGGAGGTTCATCGGAACCTTCTGCAAAAAGAACAAAGAGTTCGGCTTCCGGAGCATATTCAACATCTTCTAACCCAACAACACCAACAAGCGAATACAATCCACCATCACCGACTTTGTTACATCGTCCAATCGGTAATAAGGCGGCCAAAAGGAAGCAAAAAGAAAAGTTTGTGGAAAAACCTACTCCTAAATTTGATGCTATGAAAGATGACTTAAACAAAAAAGTTGAATTAATGTCGGGGTTTGCACGTGATTATGCACGTATTGAGAGTGAAAAAATGGAGATAGAGAGGAAAAGGGTTGATGCTGAGTTGCATGCGGCAAAGATTAATGATTTGCAAATACTCTCGAAGGATACATCAAATATGACACCAAGACAACTACAAGATCACGAATTTTTGTGCGGTGTAATTAGAGATAGATATGGAGTTAAATGA 972 0.3899 MNPNNHNSWSNFMQNCGIPSFIPNQQFCTQAQDGLETINLGEEVKTTSVMNMSKIRFQPKEDELLIQSWLNISRDPIVGVDQKGDSFWKRIGEAYNNHRHKNFPERNPLALKGRWHKKINPSVQKFVGCYKQAVAIKKSGSSESDIVSAACDIYYQDGHEKFTFQSAWKLLRDEPKWLGGSSEPSAKRTKSSASGAYSTSSNPTTPTSEYNPPSPTLLHRPIGNKAAKRKQKEKFVEKPTPKFDAMKDDLNKKVELMSGFARDYARIESEKMEIERKRVDAELHAAKINDLQILSKDTSNMTPRQLQDHEFLCGVIRDRYGVK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00312 323 Coils Coil 264 284 - -
Vifa1g00312 323 MobiDBLite consensus disorder prediction 184 214 - -
Vifa1g00312 323 Pfam No apical meristem-associated C-terminal domain 161 305 IPR029466 -
Vifa1g00312 323 PANTHER - 45 313 - -
Vifa1g00312 323 MobiDBLite consensus disorder prediction 179 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00312 Vifa-Chr1 49156385 49157356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00312 44 232 Glutathione S-transferase Gene Family AT5G41240 36.634 3.28e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00312 - - mtr:11446189 413.305