Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00310 ATGGCTTCCAACAAAAACAACATTAAAATCCACGAACACTTCAAAGTAGTTCCTCCATTATCATCAATCCAATCAACAACAACAACTCCTCTCACTTTTTTTGACATAATATGGCTAGGTTTCCATCCATCAGAGCGAATATACTTTTACACCCTCCATGATCAACACTCCCACCCCTCTTTCTTCTTTCAAGAAATTGTTCCAAATCTCAAATCTTCACTCTCTTTAACCCTCCAACACTTTCTCCCTTTAGCTGGTAAAATTGTTTGGCCTTCTGATTCTTTAAAACCATTCATCCAATTCAATCCCAATGATGATGATAATGGAGTTTCATTGCTCATAGTTGAGTCTGATGCTGATTTCAATCATGTCATTGGAAACTCACCCCATGAAGCTTCATTGACTCGTTCTTTTATTCCCAACTTGGAATCATCATATTCGTTTGCTTCTACTATGTCCCTCCAAATCACACTTTTCCCAAACGGTGGCTTCAGCATAGGAATCACTACACACCATGCCGTTTTTGATGGAAAATCTTTATCTATGTTCGTCAAAGCTTGGGCTTGTCTATGCAACAAAATAATCGGATTTGAAACACCAACTTTGTTGCCAGAGTTAGAGCCTTTATTCAACAGAGATATCATCAAAGGCACAAATGAAAATAACGTAATCGAGATCTTATCGAAGATATCCCCAACTGAAAAAGGAAATAAAAGAAGCCTAAAGATTTCACCTTCGGAACCAAAACTCGAAGACTCTCTTCGTGCTACCTTCAAGCTGTTGGCTGAAGATTTTGATAATGTTATTTAG 810 0.3778 MASNKNNIKIHEHFKVVPPLSSIQSTTTTPLTFFDIIWLGFHPSERIYFYTLHDQHSHPSFFFQEIVPNLKSSLSLTLQHFLPLAGKIVWPSDSLKPFIQFNPNDDDNGVSLLIVESDADFNHVIGNSPHEASLTRSFIPNLESSYSFASTMSLQITLFPNGGFSIGITTHHAVFDGKSLSMFVKAWACLCNKIIGFETPTLLPELEPLFNRDIIKGTNENNVIEILSKISPTEKGNKRSLKISPSEPKLEDSLRATFKLLAEDFDNVI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00310 269 Gene3D - 3 234 IPR023213 -
Vifa1g00310 269 Pfam Transferase family 16 194 - -
Vifa1g00310 269 PANTHER - 8 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00310 Vifa-Chr1 48808907 48809716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00310 23 194 Monolignol Biosynthesis Gene Families AT5G48930 28.804 2.69e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00310 - - tpra:123889238 369.777