Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00301 ATGATTGCACCAGGTTCCTTAAAGACAACCCCGACAACTTGGACAATATCCTCATTAATGTTGGTACTGATTATACCGATGAATTCGAAGTTATCCACTCCAACAAAGCCAAAAAAATTACTAGATGATTATAGAATCGGCGAGCTTGTTACTATTGGATACATATCTGATTCTTCCTCTCCAAACAACTTGATGCATGGAAACTCCGAATTCACTCATCTTGCACCTATTAAAGAAATCATGGCTCTTAACCCACGTGAGAAAATCCCATGCAAACTCATTTCAAAAACCTCACTTTCACATGATGTAAGACTCTTCCGCTTCGCATTACCGTCTGAAGATCAATTACTTGGATTACCCATCGGGAAACACATATTCTTATGTGTTTCAGTGGACGGAAGGTTGATCATGCGAGCTTATACACTGAGGAGTAGCATTGATGAAATTGGATATTTTGAACTAGTTTTCAAAATCTACTTCAAAAACGTTCACCCCAAATTTCCTAATGGTGGACTCATGTCTCAGTATTTGGATTCACTTACTATTGGGTCAGCAGTGGAAGTAAAAGGTCAGGTAGGCCAGATCGAATATCTTGGTAGAACAAACATTATGGTTCATGGGAAGCAAAAGTTCGCGAAAAGGTGGAACGGGAATTACATTGGTTTATCAGGTGGCGAATGCGATTTTGAAAGATCCTCATTAATGTTGGTATTGATTGTACCGATGAATTCGAAGCTATCCACTCCGACAAAGCCAAAAAATTACTAG 768 0.3906 MIAPGSLKTTPTTWTISSLMLVLIIPMNSKLSTPTKPKKLLDDYRIGELVTIGYISDSSSPNNLMHGNSEFTHLAPIKEIMALNPREKIPCKLISKTSLSHDVRLFRFALPSEDQLLGLPIGKHIFLCVSVDGRLIMRAYTLRSSIDEIGYFELVFKIYFKNVHPKFPNGGLMSQYLDSLTIGSAVEVKGQVGQIEYLGRTNIMVHGKQKFAKRWNGNYIGLSGGECDFERSSLMLVLIVPMNSKLSTPTKPKNY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00301 255 FunFam NADH-cytochrome b5 reductase 77 192 - -
Vifa1g00301 255 CDD cyt_b5_reduct_like 91 202 - -
Vifa1g00301 255 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 86 198 IPR017927 GO:0016491
Vifa1g00301 255 PANTHER NADH-CYTOCHROME B5 REDUCTASE 66 214 IPR001834 GO:0016491
Vifa1g00301 255 Pfam Oxidoreductase FAD-binding domain 91 197 IPR008333 -
Vifa1g00301 255 Gene3D Translation factors 78 190 - -
Vifa1g00301 255 PRINTS Cytochrome B5 reductase signature 117 128 - -
Vifa1g00301 255 PRINTS Cytochrome B5 reductase signature 138 145 - -
Vifa1g00301 255 PRINTS Cytochrome B5 reductase signature 183 197 - -
Vifa1g00301 255 SUPERFAMILY Riboflavin synthase domain-like 79 198 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00301 Vifa-Chr1 47467488 47468255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00301 78 197 NADPH P450 reductases AT5G17770 35.246 5.94e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00301 K10534 - gmx:100813471 280.411