Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00269 ATGGATCCCAAGAGCGGGTTCGCCGATATTACTGATAAGGAAAGGGAAGTTATAATGAGCTACTCCGATGTAGAGATATTATTCGTGGCCAGTAAATACTTCTTCCGAAACGCCGAGAACGCTTTTTTCCGAAGGCACGCTGTTGCAATAATCTCCATGCTCGCGAAGAGGATTGATAATGATACACTAATTCCGTATCTTGCTATGAATTATTTTGATCGCTTTTTTTCCAAAAACAGTTCGATGTTGGAGGATGTTGAAGGGTTCATCGATACTGTAAAAGTTCGTTTGATTGCTATCGCCTGTCTCACCATAGCTGCCAAGATGAGGATAAAAGACTTCTCAATTGAACACTTTTTGATTACTTATTATAGGATTGTGAATGTGAGGATAAGTCATCATATGGTGATGAGAACGGAGCTTCTCATTCTCCGTGAACTTGACTGGGAAATTCAATCGGTGACTCCCTTCACCTTTCTGAACTTCTACTACCGTTACTTTAAAAAGTACGGTGGTTTTAAGCGTCGTTGCATCAATGAGATAATAGTTCAAGCTCAAGGAGAGCACACCTTCGTTGACTATTATCCTACTGTGATAGCAATCTCCGCTTTTCTGACTGCTTCCCAAATTGCATATCCCGATCTGTATGGAGAAATTATAATTCCCTTCACACTTACCAAAGTTTTGCCGAGGTTGCTTCAGTATAAGCTCGTTCTTTGTGTGGATGCGATGGTTGATCTTTGCAATAAATTGAACATCCAGATTGAGACCCCTGAATCAGGAATTTCTTCCACTTCAGAGTTAAAAGAAAGCCAACAAAACAAGGAATCAGGAATTCCCTCCACTTCAGAGTTACAGGAAAGCCAACAAAACAAGGAATCAGGAATTCCCTCCACTTCAGAGTTACAGGAAAGCCAACAAAACAAGGAATCAGGAATTCCCTCCACTACAGAGTTACAAGAAATCCAACAAAACAAGGAATCAGGAATTCCCTCCACTTCAGAGTTAAAGGAAATCCAACAAGACAGGGGCAAGGCGAAGATGGTAGTTGATTCAAATGAAGAAGAAGATGATGACGAAGAAGAGGGGAGTCCGTTAATGCGGCAATTTCTGAACATGAGCGAGATGACGAAGAAATCTCAGGCGCTGAAGATATCAGAGAGGGTTGAGGAAGAAAACAAAAAACTGGACAAGGGAGAGACATCTGGTGGTGATGATAAGGCCAGGATTGAGGTTATAATCCCACAACCGTTGGAAAAGGGTGAGAAGATGGAGGGATACATTTCAGAAACTGCAGAGCTTGAAGAACTAAAGAGCCTTATGAACTTTGAACTGAAGTGGCCCGAAGAAGTTCCATCCACAGCTGAACTAGAAACACAATTACAAACACAAACAGTTAATCGTTCTAAGAAAGGAAGAATTCTAAGAATTGCCAAGAAAGTAGCTCATGGTGACTGCAAAGTCGGTTAG 1470 0.4136 MDPKSGFADITDKEREVIMSYSDVEILFVASKYFFRNAENAFFRRHAVAIISMLAKRIDNDTLIPYLAMNYFDRFFSKNSSMLEDVEGFIDTVKVRLIAIACLTIAAKMRIKDFSIEHFLITYYRIVNVRISHHMVMRTELLILRELDWEIQSVTPFTFLNFYYRYFKKYGGFKRRCINEIIVQAQGEHTFVDYYPTVIAISAFLTASQIAYPDLYGEIIIPFTLTKVLPRLLQYKLVLCVDAMVDLCNKLNIQIETPESGISSTSELKESQQNKESGIPSTSELQESQQNKESGIPSTSELQESQQNKESGIPSTTELQEIQQNKESGIPSTSELKEIQQDRGKAKMVVDSNEEEDDDEEEGSPLMRQFLNMSEMTKKSQALKISERVEEENKKLDKGETSGGDDKARIEVIIPQPLEKGEKMEGYISETAELEELKSLMNFELKWPEEVPSTAELETQLQTQTVNRSKKGRILRIAKKVAHGDCKVG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00269 489 SUPERFAMILY Cyclin-like 21 151 IPR036915 -
Vifa1g00269 489 SUPERFAMILY Cyclin-like 132 253 IPR036915 -
Vifa1g00269 489 Gene3D - 57 152 - -
Vifa1g00269 489 MobiDBLite consensus disorder prediction 261 337 - -
Vifa1g00269 489 MobiDBLite consensus disorder prediction 338 352 - -
Vifa1g00269 489 Pfam Cyclin, N-terminal domain 19 151 IPR006671 -
Vifa1g00269 489 Gene3D - 153 236 - -
Vifa1g00269 489 PANTHER CYCLINS 31 245 IPR039361 -
Vifa1g00269 489 MobiDBLite consensus disorder prediction 381 408 - -
Vifa1g00269 489 MobiDBLite consensus disorder prediction 261 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00269 Vifa-Chr1 41718408 41720829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00269 5 208 Core Cell Cycle Gene Families AT4G03270 29.032 7.95e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00269 - K18812 psat:127086424 469.544