Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00198 ATGGAAAGAGAAGGTGATAAGTGGAAGCAGTGTGATAAAGATGAAACTTTGAATATTCCTTTGGTAAGAGAACATGAAGAAATACAAATTTCTGGTAGCGGTTCCAACAACAATATTGTCACCACATCTTTCCTTAAAACTTGTTTCAATGGCCTCAATGCTTTATCAGGTGTTGGAATACTCTCAGTTCCATATGCATTAGCCTCAGGAGGATGGTTAAGTTTAGCACTTTTATTTTCTATTGCTGCAGTAGCATTTTACACTGGTTTATTAATGGAAAGATGCATGGAAAAAAAATCGAACATTAGAACATTTCCAGATATAGGGTTCTTGATTCTAGCAGGAGACAATTTGAGTAACATATTACCTATTGAAGAGTTTCAAGTGGTTGGTTTATCGATCGGTGCAAAGCAATTCTTTGTGATATTGGTTGCGCTAATTATTTTGCCAACGGGTGATATTGTGAATTGGAATGGAATCCCTACTGCTGTTAGCTTGTATGCTTTTTGCTATTGTGCACATCCAGTCTTCCCTACTCTCTACAATTCCATGAGGAACAAACACCAGTTCTCAAATGTCCTAATTGTATGCTTTATACTAACCACAGCTAGTTATGCATCAATGGCTATAATTGGTTACTTAATGTTTGGTTCAAATGTTGAATCACAAGTAACATTAAACTTACCACTTAACAAATTAAGTTCAAAAATTGCAATATACACAACCTTGGTGAATCCAATAGCAAAGTTTGCTTTGATGGCAACACCAATTACAAATGCTTTGAAAGAATTAGTTGGAAGAACATACAAGAATAATAGAGTGACCAATATTTTTGTGAGCACTTTGCTTGTAGTTAGCAATGTTATTGTTGCATTGAGTATTCCTTACTTTGGGTCTCTCATGTCATTGGTTGGAGCATTTCTAAGTGCCACTGCTTGTATTTTGCTTCCTTGTTTGTGTTACTTGAAGATTTCTGGCAATTATAGGAAATTAGGGTTTGAGACAGTGACAATAGTGATGATAGTATTAGTAGCTATAGTAATGGGAGTATCTGGGACATATATTTCAATTGTTGAAATAATACAAAATTTGAAATAG 1098 0.3479 MEREGDKWKQCDKDETLNIPLVREHEEIQISGSGSNNNIVTTSFLKTCFNGLNALSGVGILSVPYALASGGWLSLALLFSIAAVAFYTGLLMERCMEKKSNIRTFPDIGFLILAGDNLSNILPIEEFQVVGLSIGAKQFFVILVALIILPTGDIVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLIVCFILTTASYASMAIIGYLMFGSNVESQVTLNLPLNKLSSKIAIYTTLVNPIAKFALMATPITNALKELVGRTYKNNRVTNIFVSTLLVVSNVIVALSIPYFGSLMSLVGAFLSATACILLPCLCYLKISGNYRKLGFETVTIVMIVLVAIVMGVSGTYISIVEIIQNLK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00198 365 Pfam Transmembrane amino acid transporter protein 157 355 IPR013057 -
Vifa1g00198 365 Pfam Transmembrane amino acid transporter protein 41 148 IPR013057 -
Vifa1g00198 365 PANTHER OS05G0424000 PROTEIN-RELATED 50 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00198 Vifa-Chr1 32894628 32902442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00198 23 361 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.044 1.61e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00198 K15015 - gmx:100794374 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00198 1 32894628 32902442 Vifa1g00198 1 32894628 32902442 ECH