Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00124 ATGGCATATCAAAACTCAATTACCTTGAAAGTTTCAGTGTTGCTAATAGTTTTACTAGGAGCCGAGACTAGGGATTTCTCTATTTTTGTTAACAAAACCGTTATAATTAGGAATGATATCTCTCCACATCCAACCCCTTTAGATCTCATTGTTCATTGCCAATCAAGAGATGATGATCTTGGATTTCACACAATTGCATTTGGAGGAACTTATTCGTTTCAGTTTAGACCATTACTTTTTCCAAGATATGGCCATACTTTATTCTTTTGTAGCTTTACATGGAAAGGAAACCCCTATCTTCACTATCTTAACGTTTACAATCAAACTGTGGATGACTGCAAAGTTTGCAGTTGGAAAATAAATACAACTGGTGGTTGTAACGATTTTAAAGGATATGAGGAATGTCGGAAATGGGAAGGCGGCATTTGA 429 0.359 MAYQNSITLKVSVLLIVLLGAETRDFSIFVNKTVIIRNDISPHPTPLDLIVHCQSRDDDLGFHTIAFGGTYSFQFRPLLFPRYGHTLFFCSFTWKGNPYLHYLNVYNQTVDDCKVCSWKINTTGGCNDFKGYEECRKWEGGI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00124 142 Pfam Plant self-incompatibility protein S1 33 138 IPR010264 -
Vifa1g00124 142 PANTHER - 31 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00124 Vifa-Chr1 20940607 20941035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00124 33 126 Carbohydrate Esterase AT3G16970 44.000 1.10e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00124 - - psat:127105312 167.162