Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00085 ATGACTACCATTTCATTCACCCATAACAACCAAAAACCAAACAACATTCATCACCAAAAAGGACTCATCATTGAAGAAATTGAAGGACTCATAAAAGTTCATAAAGATGGACATGTAGAAAGACCACAAATTGTTCCCAACATCTCATGCAATTTTGCACCACAAAATGGTGTCATTTCAAGAGACATTACAATCAACAAAGAAACTAATTTATGGACACGTGTCTATCTTCCAACATCAACCTCTCATAATAACAATAACAATAACAAGCTTCCTTTGCTTGTTTATTTCCATGGTGGTGGATTTTGTGTTGGCTCCGCTTCATGGATTTGTTACCATGAATTCTTAATCAACCTCGCTTCCAAAGCGAATTGCGTTGTTGTCTCGGTTAATTATCGTTTAGCCCCCGAAAATCGTCTTCCTTCAGCTTACGACGACGCTTTCAACGCTCTCATGTGGATCAAACACGAAGCGTTATATAATAAAAACCAAAGTTGGTGGTTGAAACATTGCAACGTTTCTTCTCTTTTCCTATGTGGTGATAGCGCCGGAGCTAATATAGCTTACAATGTTGTTGCTACGCGGTTTGCGTCGTGTTCGAATTTGAATTTGAATCCGTTATTTTTAAAAGGTATTATATTGATTCAACCTTTCTTTGGAGGAGAAGAAAGGACGAATTCTGAGAAAAATCATCGTCAACTGCAAAATTCGGCGCTTAGTTTATCGGTTTCAGATACTTATTGGCGATTATCGCTACCTAATGGAGTTTCGGCTTCACGTGACCATCCATATTGTAATTCTCTTACAGCAAGTGGAATATCTAAGATGAGAGATTTGAGGGTTCCTTCTATTATGATATGTGTTTCGGAATTGGATATACTTGGAGATAGAAACTTGGAGTTTTCGAATTGTTTGGTTAAAGCTGGGAAAAGAGTTGAGACTTATGTTTATAAAGATGTTGGACATGCTTTTCAAGTGTTGCATAATTATCAACTTTCTCATGTTAGGACTCAAGAAATGGTGTCTCATATCAAGAACTTCTTGAACCAATAA 1053 0.3704 MTTISFTHNNQKPNNIHHQKGLIIEEIEGLIKVHKDGHVERPQIVPNISCNFAPQNGVISRDITINKETNLWTRVYLPTSTSHNNNNNNKLPLLVYFHGGGFCVGSASWICYHEFLINLASKANCVVVSVNYRLAPENRLPSAYDDAFNALMWIKHEALYNKNQSWWLKHCNVSSLFLCGDSAGANIAYNVVATRFASCSNLNLNPLFLKGIILIQPFFGGEERTNSEKNHRQLQNSALSLSVSDTYWRLSLPNGVSASRDHPYCNSLTASGISKMRDLRVPSIMICVSELDILGDRNLEFSNCLVKAGKRVETYVYKDVGHAFQVLHNYQLSHVRTQEMVSHIKNFLNQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00085 350 SUPERFAMILY alpha/beta-Hydrolases 24 349 IPR029058 -
Vifa1g00085 350 Gene3D alpha/beta hydrolase 9 349 IPR029058 -
Vifa1g00085 350 Pfam alpha/beta hydrolase fold 94 325 IPR013094 GO:0016787
Vifa1g00085 350 PANTHER ARYLACETAMIDE DEACETYLASE 27 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00085 Vifa-Chr1 14881998 14883050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00085 1 349 Carbohydrate Esterase AT5G16080 51.549 3.18e-121 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00085 - - gmx:100819429 464.922