Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00064 ATGAGCATAGTAAGAGGAAATGAGCAAGATTATCAAAGCATATACACATTATTAATCATGCCTATGAAATCATCAAATCCTCTTGTTGTTGGTAGTGTAATTGGAGATGTTTTGGATCCATTCATAAATTCAGTGTCTCTAACGGTTGTTTATGAAAATAACAAAGAAGTGATCAACAGTGGTGAACTCAAACCATCTCAAATAGTTAATCCACCAAGAGTTCAAGTTGGTGGAAATGACCTTAGGACTCTTTACACTCTGGTGATGGTAAACCCTGACGCACCTAGCTCTTCTGATCCTAATATGAGGGAATACCTCTATTGGATGGTAACCAATATTCCAGCAACTACTGGCACAATGTTTTGGTATGTCCTGCACAATTTCTTCAACCTTTAA 396 0.3712 MSIVRGNEQDYQSIYTLLIMPMKSSNPLVVGSVIGDVLDPFINSVSLTVVYENNKEVINSGELKPSQIVNPPRVQVGGNDLRTLYTLVMVNPDAPSSSDPNMREYLYWMVTNIPATTGTMFWYVLHNFFNL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00064 131 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 31 118 IPR035810 -
Vifa1g00064 131 SUPERFAMILY PEBP-like 17 119 IPR036610 -
Vifa1g00064 131 Gene3D - 21 128 IPR036610 -
Vifa1g00064 131 CDD PEBP_euk 45 119 IPR035810 -
Vifa1g00064 131 Pfam Phosphatidylethanolamine-binding protein 72 119 IPR008914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00064 Vifa-Chr1 12121033 12123596 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00064 K16223 - psat:127130441 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00064 1 12121033 12123596 Vifa1g06352 1 989468248 989471068 PCT