Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00027 ATGATGCCTCTTATTTCCTGTGTTCTACTGGTTGGTCTCTTTATTTTGCAACACCGTGGCTCCCACGCGATTGCTTTCATGTTTCCTCTCATAATCATCCTATGGTTACTATCTATTTTCACGATTGGCATTTACAATGTCATCAAGTGGAATCCAAGCATATATCGGGCTCTTTCTCCATATTATATATATAAATTCTTTTGGGTTACAGGAAAAGGTGGTTGGACTAATCTTGGAGGGGTATTTTTGTGTGTAACAGGAAGTGAAGCTATGTTTACAGACCTTGGGTACTACAAACAAGCATCTGTAAGGGCTGCATTTTCTTGTATCATTTACCCATGTCTAATTCTTCAGTACACGGGGCATGCTGCTTTTCTTTCAAAGAATTTATGCTTCTATTCCAGGTCAGCTAATATAAATTCTAAGAATAAATTTCTGATAGGTCATGTTGTTAATTTCTGA 462 0.3723 MMPLISCVLLVGLFILQHRGSHAIAFMFPLIIILWLLSIFTIGIYNVIKWNPSIYRALSPYYIYKFFWVTGKGGWTNLGGVFLCVTGSEAMFTDLGYYKQASVRAAFSCIIYPCLILQYTGHAAFLSKNLCFYSRSANINSKNKFLIGHVVNF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00027 153 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 4 130 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g00027 153 Pfam K+ potassium transporter 4 130 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00027 Vifa-Chr1 3020360 3021294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00027 4 129 Inorganic Solute Cotransporters AT4G23640 61.905 2.16e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00027 K03549 - gmx:100819743 225.328