Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00018 ATGGCACACCAAAACCCTCCCTCTTCAGATCCAGAAGCTCCTGAAATCACTCCAACACTTCCAACTAACCCTTCACACACAAGTTCCACTGCCAAATATGGACTTCAGAAACTGAAAAACAACTTGATTTTCCGTTCTAAATGGGCTGAACTTAATGGTGCCATGGGAGACCTTGGCACTTACATACCCATAATCTTGGCTCTCACTCTTGCTAAGGACCTCAACCTTGGCACCACATTGATTTTCAATGGTGTGTACAACATCTTAACTGGTATCATTTATGGGATTCCTATGCCTGTCCAGCCCATGAAGTCAATCGCTGCCGCAGCCTTATCGGACAAAGAATTCAACCTTCCAGAGATAATGACAGCCGGAATCTTAACCGGCGGCGTGTTGTTCGTTCTTGGGATCACAGGACTGATGCAGCTAGTGTACAAGTTAATTCCTTTATCTGTTGTGAGAGGAATTCAACTTGCACAAGGTTTGTCATTTGCTTTAACTGCTGTTAAATACGTTAGGAAAGTGCAAGATCTTCCAAAGTCTAAAGCTTTGGGTCCAAGACCTTGGTTTGGTTTAGATGGGTTGGTTCTAGCCATTGTTTGTGCTTGTTTTATTGTCATTGTGAATGGAGCTGGCGAAAAGAATCGCGGTTGTTGCGGTGCTTCAGAAGATGGTGGTTTGGATGGACAAAGGAATGGTGAAAGAAAAAGTAAGATGAATAGATTGAGAAAGATTGTGTTTTCACTTCCTTCTGCTTTTTTAGTTTTTGTGTTGGGAATTGTTTTGGTGTTTATAAGAAGACATGAAGTTGTACATGAAATTAAATTTGGACCCTCTTCAATAGAAGTGATGAAATTCACAAAACAAGCATGGAAGAAAGGTTTTATCAAGGGTGCAATTCCACAACTTCCATTGTCCATTTTGAATTCTGTGATAGCTGTTTGTAAATTGTCAACAGATCTTTTTCCGGAAAAGGAATTTTCAGTTACTTCAATTTCAGTGACAGTTGGGCTAATGAATTTGGTTGGTTCATGGTTCGGCGCTATGCCGACTTGTCATGGTGTCGGTGGATTAGCAGGACAGTATAAATTTGGTGGAAGGAGTGGAGGGTGTGTGGAACTTCTTGGTGTTGCGAAATTGCTGAGTTCAGTTGTAGGTGGTTATGGTTTTGTTCATGGCATGATTCATGGATTTTTGTTGCACGGCGCTTATCATGAAGTTGATGAATATGTGAAGCCACATTGGAGTGCAGAAGCTTGA 1260 0.4143 MAHQNPPSSDPEAPEITPTLPTNPSHTSSTAKYGLQKLKNNLIFRSKWAELNGAMGDLGTYIPIILALTLAKDLNLGTTLIFNGVYNILTGIIYGIPMPVQPMKSIAAAALSDKEFNLPEIMTAGILTGGVLFVLGITGLMQLVYKLIPLSVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKALGPRPWFGLDGLVLAIVCACFIVIVNGAGEKNRGCCGASEDGGLDGQRNGERKSKMNRLRKIVFSLPSAFLVFVLGIVLVFIRRHEVVHEIKFGPSSIEVMKFTKQAWKKGFIKGAIPQLPLSILNSVIAVCKLSTDLFPEKEFSVTSISVTVGLMNLVGSWFGAMPTCHGVGGLAGQYKFGGRSGGCVELLGVAKLLSSVVGGYGFVHGMIHGFLLHGAYHEVDEYVKPHWSAEA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00018 419 MobiDBLite consensus disorder prediction 1 30 - -
Vifa1g00018 419 Pfam Molybdate transporter of MFS superfamily 295 393 IPR031563 GO:0015098|GO:0015689
Vifa1g00018 419 Pfam Molybdate transporter of MFS superfamily 49 164 IPR031563 GO:0015098|GO:0015689
Vifa1g00018 419 PANTHER - 26 392 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00018 Vifa-Chr1 2360481 2362735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00018 23 398 Inorganic Solute Cotransporters AT2G25680 62.698 2.65e-167 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00018 - - gmx:100779658 610.142