Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01555 ATGGAACGTAATGCTCCAAACATTCCCCCCTCTGAAACTTCCCATCCTCGCCGCAACAGGGTTCGTCCCAAAAGCAGCGTCCAATTTGATGATAATACCCTCTTTCATTATGACAATGGCAACGTCATCTATGTTAATGATCCCACCAAGACTAATGAAAAGTATGAGTTTTGTGGGAATGACATCCGAACCAGCAGATACACTCTTCTCAACTTCTTGCCCAAGAATCTGTTCATTCAGTTCCACCGGGTCGCTTATCTCTATTTCCTTGCCATTGCTGCCCTGAATCAGCTTCCTCCACTAGCTGTTTTCGGCCGAACCGTGTCCCTTTTCCCCCTATTGTTTGTGCTTTGCGTCACTGCTATCAAGGATGCCTACGAGGATTGGCGCAGGCACAGGTCAGATTGCTATGAAAACAATCGTGAGTGTCTGGTTCTTCAATCGGCTCAGTTCCGTTCTAAGAGATGGAAAAATGTGCAGGCTGGTGATGTGATTAAAATCTTAGCCGATGAGATGATTCCTGCTGACATGGTCTTGCTGGGGACAAGCGATCCTAGTGGGGTTGCTTATATTCAAACAATGAATCTGGATGGTGAATCGAATTTGAAGACACGGTTTGCCAAGCAAGAAACAGTTTCAGCGTTTTTGCAAGATGCTTGTGCTGTCTCTGGAGTTATTAGATGTGAACCACCTAATCGGAATATCTATGAGTTCACTGCCACCATGGAGTTAAATGGCCATAAGATTCCCCTTAACCAGTCAAACATTGTTCTGCGTGGTTGCATGCTGAAGAACACGGATTGGATAATTGGTGTTGTGGTCTATGCAGGACAGCAAACAAAAGCAATGTTGAACAGTGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAATAGAGAAACTTTGTGGTTGTCAGTTTTTCTTTTTATCATGTGCGCAGTTGTTTCCCTAGGGATGGGTCTCTGGCTGGTACGCCATGAGCATGAGCTTGATACCTTGCCTTACTACAGAAAAAAATTCTTCAACAAAGGGCCAAATGAGGGAAGGAAATACAGGTACTATGGGATAACAATGGAAACTTTCTTCTCCTTTTTGAGCTCTATTATTGTGTTTCAGATAATGATACCAATATCTCTATATATCACAATGGAGTTAGTTCGATTGGGCCAGTCATACTTCATGATAGAGGACAAGGATATGTACGATTCTAAATCTGGATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTACGTGTTTTCTGACAAGACAGGAACTCTAACAGAAAACAAAATGGAGTTTCAGAGAGCCAGTATTCATGGAAAGAGCTACGGGAGCTCCTTGCATACAGATGATGAAAGTACAGAAGCAGCAGCCAATAACAGTAAACGAAAATGGAAACTCAAATCTGAAACTCCTGTTGATTCTGAACTAATGGCATTGTTGCGGAAAGACTCAAATTTAGATGAAAGAATTGCTGCTCATGAGTTTTTCCTCACATTGGCTGCTTGTAATACTGTGATCCCCATTATCAGTAGTGGTAAAGTTTCCAGTTGTGGAAAAGATGAATCAAATCATGAAATAGAAGGTATTGATTACCAGGGAGAGTCTCCTGATGAACAAGCTCTAGTTTCAGCTGCATCTGCATATGGATATACTCTATTTGAGCGAACATCTGGAAATGTTGTTCTTGATGTCAATGGTGAGAAACTCAGGTTGGACGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCAGTTATTCTCCGGTTTCCTGATAATGTTGTTAAGGTGTTGGTTAAAGGCGCTGACAGTTCAATGTTTAGCATTTTAGCTCCTGACAAAGAAGGAAACAACGGAATACAGCATGAAACTCAGAGTCATTTAAGTGAATATTCTATGGAAGGTTTACGAACTCTTGTAGTTGGTTCCAGGGATCTTTCAGATGCTGAATTTGAGGAGTGGCAAAACATGTATGAAGATGCAAGCACTTCATTGACTGATCGAGCTGCAAAACTACGTCAAACAGCGGCTCTGATAGAATGCAACCTAAAGCTTCTCGGAGCAACTGGAATTGAGGACAAGCTGCAGGAGGGTGTGCCAGAAGCCATTGAGTCCATGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAGGAGACTGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAGTAGAGATATGCAGCAGATCATTATAAATGGCACTTCAGAGGTTGAGTGCAGAAAGCTCTTGACTGATGCTATAGCAAAGTATGGATTGAAATCTTCAAGTAGAGAACATCAGAATCTGAAGTGCAAAACTGATTCTAGACATGATTGCCCTGATATTCACGATAATACAAAATCATTGGGCTTGCCCAAGTCAAATGCAGGGAAAAAAGAAGGAACTACTGCTCCATTGGCACTCATAATTGATGGAACCAGTTTACTTTTCAAACTTGCAACTTCCTGTACCGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAAAGCCGCACAGATGATCTGACATTAGCTATTGGTGATGGGGCAAATGATGTGTCGATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCTGTGATGGCATCAGATTTTGCCATGGCACAATTCCAGTTCTTGAAAAAATTGCTTCTGGTTCACGGACACTGGAATTATCAGCGTGTTGGTTATCTTGTTCTGTACAACTTTTACCGCAATGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGAGTGGAGTAGTGTATTTTATTCTGTTATATACACATCTATCCCCACTATCATTGTTGGTGTGTTGGACAAAGACTTGAGTCATAGTACACTCTTGCTGTATCCAAAATTATATGGTACAGGTCACAGGCATGAGGCTTACAATTTGCAATTATTTTGGATTACAATGATTGACACGTTATGGCAGAGTCTTGCTCTCTTCTACATTCCCGTATTCATCTATAAGGACAGCACAATTGATATATGGAGCATGGGCAGTTTATGGACAATTTCAGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATTAACCAGTGGGCACTGGTTAGTCATGTTGCTGTATGGGGATCAATAATCGTTACATATGGCTGCGTGGTGATATTGGATTCTATACCTGTCTTTCCCAATTACGGGACTATTTATCATTTGGCAAGTTCCCCTACATATTGGATGACAATTTTTCTTATAATAATCGTGGCATTGCTACCTCGCTTTTCTTGCAAAGCCTTTTATCAAGCCTTTTGTCCTTCAGATATCCAGATAGCCAGAGAAGCTGAGACAATGACAAAACAGCATGATAATTTGCAACCAAAGTGTCCAGTTTCCAAATAA 3504 0.4155 MERNAPNIPPSETSHPRRNRVRPKSSVQFDDNTLFHYDNGNVIYVNDPTKTNEKYEFCGNDIRTSRYTLLNFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDCYENNRECLVLQSAQFRSKRWKNVQAGDVIKILADEMIPADMVLLGTSDPSGVAYIQTMNLDGESNLKTRFAKQETVSAFLQDACAVSGVIRCEPPNRNIYEFTATMELNGHKIPLNQSNIVLRGCMLKNTDWIIGVVVYAGQQTKAMLNSAASPSKRSKLESYMNRETLWLSVFLFIMCAVVSLGMGLWLVRHEHELDTLPYYRKKFFNKGPNEGRKYRYYGITMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDSKSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASIHGKSYGSSLHTDDESTEAAANNSKRKWKLKSETPVDSELMALLRKDSNLDERIAAHEFFLTLAACNTVIPIISSGKVSSCGKDESNHEIEGIDYQGESPDEQALVSAASAYGYTLFERTSGNVVLDVNGEKLRLDVLGLHEFDSVRKRMSVILRFPDNVVKVLVKGADSSMFSILAPDKEGNNGIQHETQSHLSEYSMEGLRTLVVGSRDLSDAEFEEWQNMYEDASTSLTDRAAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESMRQAGIKVWVLTGDKQETAISIGLSCKLLSRDMQQIIINGTSEVECRKLLTDAIAKYGLKSSSREHQNLKCKTDSRHDCPDIHDNTKSLGLPKSNAGKKEGTTAPLALIIDGTSLLFKLATSCTVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMAQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTEWSSVFYSVIYTSIPTIIVGVLDKDLSHSTLLLYPKLYGTGHRHEAYNLQLFWITMIDTLWQSLALFYIPVFIYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWALVSHVAVWGSIIVTYGCVVILDSIPVFPNYGTIYHLASSPTYWMTIFLIIIVALLPRFSCKAFYQAFCPSDIQIAREAETMTKQHDNLQPKCPVSK 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01555 1167 FunFam Phospholipid-transporting ATPase 115 285 - -
Vian9g01555 1167 NCBIfam phospholipid-translocating P-type ATPase 57 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vian9g01555 1167 Gene3D - 543 676 IPR023299 GO:0000166
Vian9g01555 1167 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1153 - -
Vian9g01555 1167 MobiDBLite consensus disorder prediction 453 474 - -
Vian9g01555 1167 Pfam Cation transport ATPase (P-type) 537 621 - -
Vian9g01555 1167 Gene3D - 413 426 - -
Vian9g01555 1167 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Vian9g01555 1167 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 713 IPR023299 GO:0000166
Vian9g01555 1167 SFLD C1.7: P-type atpase like 414 924 - -
Vian9g01555 1167 FunFam Phospholipid-transporting ATPase 542 677 - -
Vian9g01555 1167 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Vian9g01555 1167 Pfam E1-E2 ATPase 141 388 - -
Vian9g01555 1167 SFLD p-type atpase 414 924 IPR044492 -
Vian9g01555 1167 Gene3D - 120 286 - -
Vian9g01555 1167 Pfam Phospholipid-translocating P-type ATPase C-terminal 901 1141 IPR032630 -
Vian9g01555 1167 Gene3D - 427 439 IPR023214 -
Vian9g01555 1167 Gene3D - 440 476 IPR023299 GO:0000166
Vian9g01555 1167 SUPERFAMILY HAD-like 417 918 IPR036412 -
Vian9g01555 1167 Gene3D - 696 913 IPR023214 -
Vian9g01555 1167 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Vian9g01555 1167 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Vian9g01555 1167 SUPERFAMILY Calcium ATPase, transduction domain A 140 282 IPR008250 -
Vian9g01555 1167 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1139 IPR023298 -
Vian9g01555 1167 CDD P-type_ATPase_APLT_Dnf-like 59 1033 - -
Vian9g01555 1167 NCBIfam HAD-IC family P-type ATPase 362 454 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01555 1167 NCBIfam HAD-IC family P-type ATPase 844 959 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01555 1167 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01555 Vian-Chr9 31865758 31870960 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01555 38 1152 Primary Pumps ATPases AT5G04930 56.306 0.0 1301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01555 K14802 - gmx:100788740 2034.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00803 2 11850370 11855756 Vian9g01555 9 31865758 31870960 PCT