Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01547 ATGTATGAAGATACGAGCACTTCATTGACTGATCGAGCTGCAAAACTACATCAAATGGGGGCTCTTATAGAATGCAACCTAAAGCTACTTGGACCAACTGGAATTGAGGATGAGCTGCTGGAGGGTGCACCAGAAGTCACTGAGTCCGTGTGGCAAGCTGAAGTTAAGGTCTGGGTTCTTACTGGTTATAAGCAAGAGACTGAGTGGAGATATGCAGCAGATAATTATAAATGGCACTGCAGAGTGTGGTCCACCGGCACCGCCACCTCATCCAGACAAGTCCGCTTACATTTGTACGACACCGGCAACCTCGTACTCCTCGAAGATTCCTCCGACAGCGCTGTTTTGTGGCAGAGCTTCGATTTCCCGACCAACACACTTCTTCCAAACCAGCCTCTGAGTGGGAGCACCAACCTCGTTTCCTCGAGAAGCCGGAGCAACCACTCCTCCGGTTTCTACAGGCTCTTCTTCGACTTCGAGAATGTTCTGCGGCTCATGTACCAGGGCCCTCGAGTTTCTAGCGTTTTCTGGCCCTACGCTTGGCTTCAGAGCAACAACTTCGGTAATGGCAACGGCAGATCCACTTTCAACGATAGCAGGATTGCTGTGCTTGATGAGTTGGGTGGCGTGCTTTCTTCCGACAACTACACTTACAGAACGATCGATTAG 669 0.5037 MYEDTSTSLTDRAAKLHQMGALIECNLKLLGPTGIEDELLEGAPEVTESVWQAEVKVWVLTGYKQETEWRYAADNYKWHCRVWSTGTATSSRQVRLHLYDTGNLVLLEDSSDSAVLWQSFDFPTNTLLPNQPLSGSTNLVSSRSRSNHSSGFYRLFFDFENVLRLMYQGPRVSSVFWPYAWLQSNNFGNGNGRSTFNDSRIAVLDELGGVLSSDNYTYRTID 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01547 222 Gene3D - 63 167 IPR036426 -
Vian9g01547 222 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 171 IPR036426 -
Vian9g01547 222 SUPERFAMILY HAD-like 22 86 IPR036412 -
Vian9g01547 222 Pfam D-mannose binding lectin 81 135 IPR001480 -
Vian9g01547 222 PANTHER OS07G0415500 PROTEIN 77 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01547 Vian-Chr9 31761131 31764705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01547 2 67 Primary Pumps ATPases AT5G04930 51.515 3.30e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01547 - - var:108347269 290.426