Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01523 ATGGGATGGTTAAGGTCGTATCTGCCAGTGATGGGTATGGTGCTGAATCAGTTCATTTATGCAGGAGTTAGTCTCAGCACAAGACTTGTTTTCTCAGCAGGAATGAGTCCAAGGGTGTTTGTGGTTTATCGCCATGTTCTTGCAACCATTGTAATTGCTCCATTAGCTTATTTCTCACGCAGAAATTCTGGCTCCTATTACTTAAACTTGAAGAGTTTCTCATGGATATTCTTGATCTCCTTCATAGGCATTGTCTTGAATCAAAATTTCTTTTGCGAGGGTTTATACCTGACAAATTCTTCGGTGGCAAGTGCAATGGTGAATCTTGTTCCAGCAGTAACATTTGTGATAGCAACTTGTGCAGGAATGGAGAAAGTGAACATTCGAAGCTGGAGATCTATAGCGAAGATAGTAGGAACAGTGATATGTGTGAGTGGAGCAGTGTCCATAGCTTTGTTAAAGGGTCCAAAGCTTCTAAATGCAGAAAGCCTGCCATCAAAATCCATCACCATGGCTTCATCACAAGCTGATAATTGGTTACTGGGCTGTCTGTTTCTCACTGCATGCTGCTGTTCTTGGTCAATCTGGCTCATTTTGATGGTTCCTGCCTCTAAAAGCCACCCAGATCCCTTGTCCTTTTCAGCTTGGATGTGTTTTATGGCAACTCTGCAGTCAACGTTAGTGGCATTAGTGTTGGAACAAGATCCACTTGCATGGAAGATTAATTCTCTACTTGAATTTGGTTCTGCTATGTATGCAGGAGTTATGGGATCTGCAGTAACATTCTTTATCCAAGCATGGTGCATCTCACTGGCAGGTCCTCTTTTCAGTGCAATGTTCAATCCTCTTATGGTAGTCATTGTCACCATATTGGCTCCTTTATTACTACATGAGCAAGTATACTTTGGAAGCTTGATTGGGTCAATAGCAGTGATAATTGGGTTATATATTGTGCTATGGGGTAAAGCTGAAGAAGTTGTGGTGCTGAATGTTAAGACAGATTCAGAATCAATGCTTAATCCCACAGAGCAAGTCAAAATATCCATAGCATGTTCTAAAGCCAATTTGGAAGAACCTCTTCTATCTGCTCATTCTCCTTCACATAATTAA 1110 0.4117 MGWLRSYLPVMGMVLNQFIYAGVSLSTRLVFSAGMSPRVFVVYRHVLATIVIAPLAYFSRRNSGSYYLNLKSFSWIFLISFIGIVLNQNFFCEGLYLTNSSVASAMVNLVPAVTFVIATCAGMEKVNIRSWRSIAKIVGTVICVSGAVSIALLKGPKLLNAESLPSKSITMASSQADNWLLGCLFLTACCCSWSIWLILMVPASKSHPDPLSFSAWMCFMATLQSTLVALVLEQDPLAWKINSLLEFGSAMYAGVMGSAVTFFIQAWCISLAGPLFSAMFNPLMVVIVTILAPLLLHEQVYFGSLIGSIAVIIGLYIVLWGKAEEVVVLNVKTDSESMLNPTEQVKISIACSKANLEEPLLSAHSPSHN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01523 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 145 - -
Vian9g01523 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 322 - -
Vian9g01523 369 PANTHER WAT1-RELATED PROTEIN 8 332 IPR030184 GO:0016020|GO:0022857
Vian9g01523 369 Pfam EamA-like transporter family 11 144 IPR000620 GO:0016020
Vian9g01523 369 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01523 Vian-Chr9 31391850 31394167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01523 1 369 Nodulin-like Gene Family AT4G30420 50.263 5.08e-128 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01523 - - var:108346816 573.933