Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian9g01503 | ATGGCTGAAAAAGATGATGGTTTGGGATTGGGGTTGAGTTTGAGATGGGGAGAAAATGATGATAATAACATGAATGAACAACACCCTTTCATCATGCACAAACCTCCTCATCCTGTTCCAAACCAAAGGGCTTCTTCTTTCAATAGTTTGTTCCATTTCCATGGTGCGTCTCATGTGACCAATCGAAGCTCTGAGCCACCACCGTTCTTCTTTGGAATAGACGTGAACTTGCCACCACCACCATCGGTGGCACCATGCTACGAGGAGAACGGTGTGTCTTCGCCAAACAGTGCAGTTTCGAGCATCAGCGGGAAGAGGAGCGAAAGAGAGGAGAATGAGAGGGGGTCATGTTCTCGAGGCGGAAGTGAAGATGATGACGGCGGAGGATGCGGTGGTGATGCCGATGGCGACACATCGAGGAAGAAGCTCAGGTTGTTGAAAGAACAGGCCTTGGTGCTTGAAGAAACATTCAAGGAACACAACACTCTGAATCCTAAACAAAAGCAAGCTTTGGCAAAGCAGTTGAATCTGAATCCTAGACAGGTTGAAGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGCTGAAGCAGACTGAAGTGGATTGTGAATACTTAAAGAGGTGCTATGAGAATCTAACGGAGGACAATAGGAGGCTACAGAAGGAAGTACAAGAGCTAAGAGCATTGAAGTTTTCCCCACAGCTCTACACGCACATGAACCCTCCAACCACTCTTACAATGTGCCCTTCCTGTGAGCGTGTTGCTGTCTCATCTGCATCCTCCTCATCGGCCGCCATGCCTTCTGTGCCGCCTCCAAGCAATCACAACCCATTAGGCCCTACCATCCGGCGGCCGGTGCCTGTCAACCCTTGGGCGGCGATGTCAATTCAGCACCGTCCCCCACCATAA | 909 | 0.495 | MAEKDDGLGLGLSLRWGENDDNNMNEQHPFIMHKPPHPVPNQRASSFNSLFHFHGASHVTNRSSEPPPFFFGIDVNLPPPPSVAPCYEENGVSSPNSAVSSISGKRSEREENERGSCSRGGSEDDDGGGCGGDADGDTSRKKLRLLKEQALVLEETFKEHNTLNPKQKQALAKQLNLNPRQVEVWFQNRRARTKLKQTEVDCEYLKRCYENLTEDNRRLQKEVQELRALKFSPQLYTHMNPPTTLTMCPSCERVAVSSASSSSAAMPSVPPPSNHNPLGPTIRRPVPVNPWAAMSIQHRPPP | 302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian9g01503 | 302 | MobiDBLite | consensus disorder prediction | 19 | 39 | - | - | |
Vian9g01503 | 302 | Pfam | HD-ZIP protein N terminus | 1 | 110 | IPR006712 | GO:0005634 | |
Vian9g01503 | 302 | Pfam | Homeobox associated leucine zipper | 196 | 229 | IPR003106 | GO:0006355|GO:0043565 | |
Vian9g01503 | 302 | ProSiteProfiles | 'Homeobox' domain profile. | 136 | 196 | IPR001356 | GO:0003677 | |
Vian9g01503 | 302 | MobiDBLite | consensus disorder prediction | 82 | 138 | - | - | |
Vian9g01503 | 302 | MobiDBLite | consensus disorder prediction | 89 | 103 | - | - | |
Vian9g01503 | 302 | SUPERFAMILY | Homeodomain-like | 126 | 197 | IPR009057 | - | |
Vian9g01503 | 302 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 9 | 268 | - | - | |
Vian9g01503 | 302 | Coils | Coil | 202 | 229 | - | - | |
Vian9g01503 | 302 | MobiDBLite | consensus disorder prediction | 262 | 284 | - | - | |
Vian9g01503 | 302 | SMART | halz | 196 | 239 | IPR003106 | GO:0006355|GO:0043565 | |
Vian9g01503 | 302 | Pfam | Homeodomain | 140 | 194 | IPR001356 | GO:0003677 | |
Vian9g01503 | 302 | MobiDBLite | consensus disorder prediction | 104 | 121 | - | - | |
Vian9g01503 | 302 | CDD | homeodomain | 140 | 197 | IPR001356 | GO:0003677 | |
Vian9g01503 | 302 | FunFam | Homeobox-leucine zipper protein 18 | 126 | 201 | - | - | |
Vian9g01503 | 302 | Gene3D | - | 145 | 194 | - | - | |
Vian9g01503 | 302 | SMART | HOX_1 | 138 | 200 | IPR001356 | GO:0003677 | |
Vian9g01503 | 302 | ProSitePatterns | 'Homeobox' domain signature. | 171 | 194 | IPR017970 | GO:0000981|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian9g01503 | Vian-Chr9 | 31141345 | 31143925 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian9g01503 | 60 | 300 | Homeobox Transcription Factor Family | AT3G60390 | 62.548 | 1.28e-92 | 275 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Vian9g01503 | HD-ZIP_N | 6.2e-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian9g01503 | K09338 | - | gmx:100798480 | 389.808 |