Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01501 ATGATTGACCAAAAGCACATCCAAGTTATCCAAGTGGAAAATGTTGAGATAAGGCACTCTCCACAGCCACTCATAATCACAGACACAGCAATCACCACAGAGAAACCAAAACTATATTGTCAGATTCCAGAAAAGCAAGCAGAAGGCAAAGAAAGAACTTGGCTAGCTAAGGATCAAGCAAATACAATGGCTCAAGCAATGTCATCAATGGCAGGTAGCCTTCAACTCAGTGGCTCCACACGTTTGCATGCCAAAAGGGTGTCTTCAGTCACACGTGCAGGATTCGCAGTTAGAGCACAACATCAACAAGAACAAGTGAGTGGTGAGGCTCACAGTAGCCGTAGGACAGTGCTGTCTCTTGTTGCTGCTGTGAACTTTCCTTGCGCTGTACAAGGAACTATATTTTCTCAGAGGAAACAATTATCTCATGGATGCACAAACCAAAATTCAAAGGATTATTACCTAATGCAGGATAGTTCCATGTTGCGTTCTGAAAAATCATTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTTTTTTCCCAACTTTGTATTCTTATGCAAAGACAAAGAGTAAGAATCCTTATGATGAAAAACGATTGCTAAAACAAAATCAGCGGATACAGAAGGAAAACAATGCGCCAGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAATAGTATCTTCAGAGAACTATGTAAAGAGTAACTCGGGACTCATATACCGAGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTACATTGGTTATAACGAATCTGGTCGTCGAATTGACAGCACTTACTTGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAGGGAATCAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTGGAGCTATTAAGCGTGCAAAATTGTGAAAGGAGGACCGTAGCCTTTTACTCAGATGTAATTTGCAATTGA 1095 0.4192 MIDQKHIQVIQVENVEIRHSPQPLIITDTAITTEKPKLYCQIPEKQAEGKERTWLAKDQANTMAQAMSSMAGSLQLSGSTRLHAKRVSSVTRAGFAVRAQHQQEQVSGEAHSSRRTVLSLVAAVNFPCAVQGTIFSQRKQLSHGCTNQNSKDYYLMQDSSMLRSEKSLRRTLFLSVLVSTGFFPTLYSYAKTKSKNPYDEKRLLKQNQRIQKENNAPEDFPNFIREGFEVKIVSSENYVKSNSGLIYRDFVVGQGDCPKDGQQVTFHYIGYNESGRRIDSTYLQGTPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTVAFYSDVICN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01501 364 Gene3D - 203 356 IPR046357 GO:0003755
Vian9g01501 364 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 102 364 IPR044239 -
Vian9g01501 364 SUPERFAMILY FKBP-like 190 348 - -
Vian9g01501 364 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 261 348 IPR001179 GO:0003755
Vian9g01501 364 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 258 324 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01501 Vian-Chr9 31120952 31126556 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01501 256 346 Calmodulin-binding Proteins AT5G48570 35.484 6.08e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01501 - - var:108347486 689.493