Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01495 ATGGGAGAGGGGTCTGTTGAACTTGATGCTATTATAAAGGAAGCTGTTGATCTGGAGAACATTCCTCTTGAAGAGGTTTTTGATAATCTCAAATGTACAAGAGAAGGTTTAAGCTCTCAGCAAGTACAAGAGAGGCTAGACTTGTTTGGATACAATAAGCTTGAAGAAAAGAAGGTACTTCGTGATGGAAAATGGAGTGAAGAAGAAGCTTCGGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTTGGTGACATAATTCCTGCTGATGCACGTCTCCTTGAAGGTGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGGGAGTCACTTCCTGTCAGCAAACACCCTGGAGAAGGAGTATATTCTGGTTCAACCTGCAAGCAAGGAGAAATTGAGGCAGTGGTTATTGCAACCGGAGTTCACACCTTTTTTGGGAAGGCAGCTCATCTTGTGGAGAACACAACACATGTTGGACATTTCCAGAAGGTTCTAACATCTATTGGGAACTTCTGCATCTGTTCAATTGCTGTTGGTATGGTCATTGAAATCATTGTGATATATGCAATCCATAAAAAGGGATACAGAAATGGGATTGATAACCTTCTGGTGCTATTAATTGGTGGCATCCCTATTGCAATGCCAACAGTCCTTTCTGTTACAATGGCTATTGGTTCACACCGGTTGTCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAGATGGCTGGAATGGATGTGTTATGCAGTGACAAGACAGGCACATTAACTCTTAACAAGCTTTCAGTGGACAAGAATATCATTGAGGTTTTTGTTAAAAACGTTGACAGTGATATGGTTGTACTTATGGCCGCAAGAGCATCAAGGCTAGAGAACCAGGATGCAATTGATGGTGCTATAGTTTCAATGTTAGCAGACCCAAAGGAGGCAAGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTAACATACCTTGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGAGCACCAGAGCAGATTCTCAATCTTGCATATAACAAATCAGAAATACAACAAAAGGTTCATGCAATCATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTTGCCCGCCAGGAAGTACCTGAGGGAACTAAAGACAGTCCAGGAGGACCATGGGAATTTGTTGGCCTTCTGCCTCTTTTCGATCCACCTCGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTTGATCTTGGCGTGAGTGTCAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGACGTCTTGGGATGGGGACTAACATGTATCCTTCTTCATCGCTACTTGGTGAAAATAAAGATGGATTGGGTGCTGTCGCTGTTGATGATCTCATTGAGAATGCTGATGGTTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACACATTTGTGGGATGACTGGTGATGGGGTGAACGATGCACCTGCCTTGAAGATAGCAGACATAGGTATTGCTGTAGCAGATGCTACAGATGCTGCCAGAAGCGCATCTGACATAGTCCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCAGTTCTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAATTACACAATATATGCCATATCTATCACTATTCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTTGACTTTCCTCCCTTCATGGTTCTTGTCATTGCCATTCTTAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCCTCTCCATTTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGATTGTTCTTGGCAGCTATCTGGCTCTAATGACTGTGATCTTCTTCTATATAGTTGTTGAAACAGACTTCTTTCCTAACAAATTTGGCGTGAGACACTTTCATTATGATCCAAATGCTGAGGACAGTGATCCAACCAAAAGAATGTTGGGATCTGCTGTCTATCTTCAAGTTAGTACCATTAGTCAAGCCTTAATTTTCGTGACAAGGTCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCATTGCCTTCATCATTGCTCAAGCGATTGCTACTGTTATATCTGCCACTCTCACTTGGGATGTTGCTGGGATCAGAAGAATCGGTTGGGGCTGGACAGGAGCTATTTGGCTTTACAATACTGTAACTTATTTACTTCTAGATCCTTTGAAGTTTGCAGTTCGTTATGCATTAAGTGGAAGGGCTTGGAATCTGGTGGTCAACCAAAGGACCGCATTCATCAACAAAAACGACTTTGGAAGAGAAGCTCGTGAGGCTGCATGGGCTACTGAGCAGAGAACCTTACATGGCCTCCACTCTGCTGAGTCAAAAGGGTTTACAGATAAGCACACCTTCAGAGAAATTAATACATTGGCAGAAGAGGCAAGGAGAAGAGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTGAAAGGTAGAGTGGAATCATTTGCCAAGCTAAGGGGTTTGGACATAGATGCCATGAACGGACACTACACTGTCTAA 2646 0.4267 MGEGSVELDAIIKEAVDLENIPLEEVFDNLKCTREGLSSQQVQERLDLFGYNKLEEKKVLRDGKWSEEEASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLTSIGNFCICSIAVGMVIEIIVIYAIHKKGYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEVFVKNVDSDMVVLMAARASRLENQDAIDGAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYLDAAGKMHRVSKGAPEQILNLAYNKSEIQQKVHAIIDKFAERGLRSLAVARQEVPEGTKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDGLGAVAVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPFPDSWKLSEIFATGIVLGSYLALMTVIFFYIVVETDFFPNKFGVRHFHYDPNAEDSDPTKRMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVIAFIIAQAIATVISATLTWDVAGIRRIGWGWTGAIWLYNTVTYLLLDPLKFAVRYALSGRAWNLVVNQRTAFINKNDFGREAREAAWATEQRTLHGLHSAESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01495 881 SUPERFAMILY HAD-like 248 557 IPR036412 -
Vian9g01495 881 FunFam Plasma membrane ATPase 264 411 - -
Vian9g01495 881 Gene3D - 140 745 - -
Vian9g01495 881 SFLD Haloacid Dehalogenase 234 561 - -
Vian9g01495 881 PRINTS P-type cation-transporting ATPase superfamily signature 406 417 - -
Vian9g01495 881 PRINTS P-type cation-transporting ATPase superfamily signature 510 529 - -
Vian9g01495 881 PRINTS P-type cation-transporting ATPase superfamily signature 102 116 - -
Vian9g01495 881 PRINTS P-type cation-transporting ATPase superfamily signature 428 438 - -
Vian9g01495 881 PRINTS P-type cation-transporting ATPase superfamily signature 533 545 - -
Vian9g01495 881 PRINTS P-type cation-transporting ATPase superfamily signature 252 266 - -
Vian9g01495 881 Gene3D - 830 881 - -
Vian9g01495 881 PRINTS H+-transporting ATPase (proton pump) signature 510 526 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01495 881 PRINTS H+-transporting ATPase (proton pump) signature 368 386 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01495 881 PRINTS H+-transporting ATPase (proton pump) signature 691 712 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01495 881 PRINTS H+-transporting ATPase (proton pump) signature 541 566 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01495 881 PRINTS H+-transporting ATPase (proton pump) signature 482 498 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01495 881 FunFam Plasma membrane ATPase 404 558 - -
Vian9g01495 881 Gene3D - 57 139 - -
Vian9g01495 881 Pfam haloacid dehalogenase-like hydrolase 248 524 - -
Vian9g01495 881 SUPERFAMILY Calcium ATPase, transduction domain A 58 152 IPR008250 -
Vian9g01495 881 Pfam E1-E2 ATPase 57 231 - -
Vian9g01495 881 Pfam Cation transporter/ATPase, N-terminus 20 58 IPR004014 -
Vian9g01495 881 Gene3D - 249 547 IPR023214 -
Vian9g01495 881 NCBIfam HAD-IC family P-type ATPase 485 587 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01495 881 NCBIfam HAD-IC family P-type ATPase 57 459 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian9g01495 881 SFLD p-type atpase 234 561 IPR044492 -
Vian9g01495 881 CDD P-type_ATPase_H 58 772 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vian9g01495 881 ProSitePatterns E1-E2 ATPases phosphorylation site. 254 260 IPR018303 -
Vian9g01495 881 PANTHER CALCIUM-TRANSPORTING ATPASE 19 58 - -
Vian9g01495 881 FunFam Plasma membrane ATPase 55 139 - -
Vian9g01495 881 NCBIfam plasma-membrane proton-efflux P-type ATPase 57 736 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vian9g01495 881 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 778 IPR023298 -
Vian9g01495 881 Gene3D - 264 411 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01495 Vian-Chr9 31038483 31045457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01495 58 881 Primary Pumps ATPases AT5G62670 79.273 0.0 1361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01495 K01535 - gmx:100806187 1518.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01495 9 31038483 31045457 Vian9g01495 9 31038483 31045457 ECH