Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01440 ATGGTTGAGATTGAACGAAGAAAATGTGTGATGATTGGAGGCGATGTTGATGCTTCTCGCGTGGTCGCAATTCTGTGTGCATTTTTTGAACTGGTTTCGCGAAGGAGATTGCAACTCTGCAATTTTATGGTTCGCATGGTGGTGGCGGCACTAAGGACTTGCGATGTTGATGGTGGCGACGACCTGAGGCAGTGGTGGCAAGGTAGGCGTTGCTTGTGTTGCGAAGAAGAAGTGGCAAGAATCGCCACACATCTCAACTCTGCAACTCCTCGCTCTTCTCTTTTCACAGCTTCTGAAAATGGTACTTTCTTCCACTTTCTGACCAAGCGAACCAAGAAGGCCGGTATTGTTGGAAAATACGGTACGTGTTCGGTTTCGATTGTTGCTGAACGTTTTCCGTGCACCCGATATGGTGCTAGTTTAAGGAAGCAAATTAAGAAGATGGAAGTTAGTCAGCACAGTAAATTTTTCTGTGAGTTCTGTGGAAAGTACGCTGTTAAGAGGAAGGCTGTTGGCATTTGGGGATGCAAAGACTGTGGAAAAGTGAAGGCTGGAGGTGCTTATACATTGAATACTGCCAGTGCCGTGACTGTCCGAAGCACCATTCGAAGGCTGAGGGAGCAGACCGAGAGTTAA 636 0.4717 MVEIERRKCVMIGGDVDASRVVAILCAFFELVSRRRLQLCNFMVRMVVAALRTCDVDGGDDLRQWWQGRRCLCCEEEVARIATHLNSATPRSSLFTASENGTFFHFLTKRTKKAGIVGKYGTCSVSIVAERFPCTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01440 211 PANTHER ZGC:171772 103 210 - -
Vian9g01440 211 Pfam Ribosomal L37ae protein family 110 207 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vian9g01440 211 SUPERFAMILY Zn-binding ribosomal proteins 135 201 IPR011332 GO:0006412
Vian9g01440 211 Gene3D - 125 211 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01440 Vian-Chr9 30304085 30312357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01440 107 211 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 80.952 4.81e-54 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01440 K02921 - cit:102618361 180.644