Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01438 ATGTCCTTCAATCAATCAAAGGTGGAAAAGAACGACGTCGTTTACAGAAGAAACGGACGATCATCCACCTTTAACCAGCAAAGAGGTTCCTACGGCAAAGCTGCTGGCGATGGCGGTGGAATCGCGCCGTCAAACAATTCATTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACAGAATCAAATAATGCATCTGCTGCTCGGAACATTAGTAATGGTATCCATGGACAGTCCCACTTACATGGTGCACCAGATGGGCCAATTACAAAGTCATCTGAATCATCAGCTGGGCATAAGAGCACTGGAATTGTTCCAAAGGCTGAAACTGCTACATTGCCCCCTTTAATTTCTGATCCAGTACTTCCCACAAGCCTTGCTAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTGTTCCTGGCGTCATTAATGGGATGGCAATTCCTGCTCGTACATGTTCAGCTCCTCCTAGTTTTGATAAGCAGAAGCCTGATCAGGCTCTTGATGACCCTGACAAATCTGTGTCTTCGGATCCAATTCCTCCTGTTCCAAAGCAGCAGAAATCACACGAGAAAGATGCTGGTGTCAATGAGCAATCTAACGTTGAGATTAAGGACAACAAGGATTCTGAGGTGTCAATTTTAACCTCGGTAAATCACATGTCAAAACCCTTTGTTGCTCCTGTAACTGGGATTTCAGTCTCAACTTCATATCACCAATCACAGGCTCCTTTACAGTTTGGAGGTGCTAATCCACAGATTCAATCTCATGGCATGACAACAACGTCCATCCAAATGCCTATACCGATGCCTTTACCAATTGGTAATGCTACACAAGTGCAACAGCCGGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTATTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTTGTCAATATCCACAACAGAAAGGAGGAAAATTTGCAAGTCCTCGTAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTGATAAAAGGATGGATGCATTCTCAAATGGTGGGTCATCTTGTGTTAGACCACATCCTAACATACCTTCTCAATCCCAGCCTGTTAAATCTTTTCCGGCTTCTCATCCTGTGAACTATTTTCCATCCAACTCGTATAATACAAATTCTCCTTATTATCCACCTAATTCTCTCCCATTAACAGGTAGCCCAATGACTCCTAATTGTCAACCAACAACATTTAATTTTCCTCTGCACCATGGTCCCCAAGGTGTGAGTTTTATGAATTCATCTTCACATGGTTCCTCGCCTACTAATAAAACTAGCACTCCAGCAGGGATTACATCTATGACCATTAAGCCTAATGGTACAACTTCTATAGTGGACTCCTCCTTGTCGAATTCCTGTATCGCTGATGTTCAAAATGGAGAATCCCCTGGTTCAACAATATCTTGTGATGTTAGCTCCTCTGTGCTGCAAAAAGGATCGGAAACCTGTTCAGAAGTTTCTCCACAACAATCTAAGTTTTCTAGTGATTTTGTCACAAATGTGTCTAATAATGAAGGTGGAAGGGAATCTCTCGCTATCTCCAACTCTTTGAAGGATAAAAAACCAGGGAAGAAAGATCAAATAACACAAAATCAGGTTTCTGTACTATCTCCCACAATGGACTCTATACGTTCTGGAGTTGTTGATCAAAATATATCTGATATTGGAGTACCCGATGCTTTAGGAACTAAAAAAAATTATTCTGCAGCAATTACTATTGAAGATCTTCCAGGATCTGATACAATTTCAACTGGTGTTGAAGTGGAGACCAATGGGTCTGTAGAAGCTTCTGCTTATGTTTCAGTGGAAGGATGTGGTGCACAAACTATTGACAAAGTTCACAATCAGATGCCTGATAAGACATATAAATTAGTTGAAGGAAACTTTGGCTCATCAGATCTGCAGTCTACTGATCTTCCAAAAACAACACTAAAGCATTTTAAGAACGATTCAGAGAATGTTGATGTTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAAACCAATCTAAAGGAAAGAAGAAGAGAAGAGAGATACTTCAGAAAGCAGATGCCGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCTGGGGAAAAGAGAGGTGTCTTAAGTTCTGAGAGCAAGGAAAGTGTTACTAGTCCTCTAAGCTTGAAACAATTTGATGTTGGTCAGTCTGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAGCTTGATGATTGGGAGGATGTTGCTGACATGTCTACCCCTAAACTGGAGGTTCATGACATATCTCAAAAAGTAGGTGAAGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTGCATTGATCTTCCTGAAGGTTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCGCATCCTAATCCTGGAAGAGCTGTAGGTGGGTTGTCTCGGATGGATCGTCGTGGCGATGTGATTATGGAGGACGATAGATGGAACAGAGTTTCTGGTTCTTTTCGTGCTGGACGTGGTCCAGAAGGCACCGGAGGAAATTCAGGATTTCGATATGGTCATGGAGGCAACTTTGGTGTTTTAAGGAATCCTCGTGCACAAACACCTCTACAATACAGTGGAGGGATCCTTTTTGGGCCAATGCAATCTGGGGGAAATCAAGGTGGAAGAAATATCCCTAATGGGGAGAGATGGCAGCGATCTGCTAGCTTCCAGCAGAGGGGCTTAATTCCTTCTCCAAACCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTACGAAGTGGGTAAAGTGACAGATGTGGAAGAGGTAAAACAAAGGCAGTTGAAAGCTATCTTAAACAAACTAACACCACAAAATTTTGACAAACTCTTTGAAAAGGTGAAAGAAGTTAATATTGACAATGCAATCACCCTCATCGGTGTCATTTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAACGAAAAAATAACTTTTAAAAGGTTATTATTGAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGGGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGGAGAAAGAAGAGTTAAGGCAAGAAGACGAATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAAGATCCAGATGAAGAAAACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAGTTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGACGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCATGCTGGTAGGTCAAATCGTGGTCCTGGTAACAATCAATCAAGTAGAAGGAATCCCATTGATTTTAGTCCAAGAGTGTCGTCTTCTAATTCTCAAATGGGTGGATTATGTGGTCTTCCAACTCAAGCACGTGGCTATGGTGGCTCTCAGGATGCTCAATTTGAAGAACAACAATCTTATGAAGCTAAGACTTTAAACTTGAAGAGTGTTTCACCTGCTGCTCAATTGCAAGGATCCATAATCTCTCAGAATTCTTATTCAGATAAGATTGTGTCAGAAGAACTGAGAGACATGTCCTTGTCAGCCATAAGAGAATACTACAGGTGGGTAAACCCGACAACTGAACCGCAGTATAACTTGCCTAGGTGTGCTAGAGATGAGAAAGAACTTGTTTTGTGTATCAAAGATTTGAACTCTCCAAGCTTTTATCCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAAAGAGATCTTCTTGCCAAACTACTTATCAACCTAGTGAAATCTCAACATCACACCTTGAGTCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCAGCTGAGTTTCTTGGCCGAATTTTTGCTAAAGTCATAATAGAGAGAGTAGCTACTTTTACTGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCTGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGCAAAACCAAAAGAAAAAAGGGAAAGACAAGGAAAAGCTTTTGAAGATGCTCAAAAGGGAGAAGTACCTTTTGGTGATCTTTGTGATATTTCTTCCTTTTTTCTTTGCTTGTGTTGATGGTAAGTACTTTGTGCTGGTGCATGGAGCTTTTCATGGTGCATGGTGTTGGTATAAGGTGGCTGATCAACTGAAATCAGAAGGTCAGAATGTGACAACTCTAGATATGGCAGCATGTGGTGTGAATCCAAAGCAGACTGAAGAAGTTGATTCAGTTTCAGAATACCATAAGCCTCTGATCACATTCTTGGCCTCTCTTCCTCCACAGGAAAAGGTCATTCTTGTAGGTCATAGTCTTGGAGGGCTATCAGTATCCATTGCCATGGAAAAATACCCTCAGAAAATCTCTGTTGCAGTTTTCATCACTGCAGCTGTTGTCACTCACAACCTCACCTACCTTGCTTTTCTTCAAGAGGCAAATAGAAGATTGGGAAATGATTTGGTGGAACAATACTTCATATTGGATGGAAACAAAGCTCCAATCCTCTCATCAACTGGAAGAATCATTCAAGCAATTGAAAAGTTAACGAATGATATATTTGAAAAATTGACTCCGTATAATCTTGTTTAA 5196 0.4065 MSFNQSKVEKNDVVYRRNGRSSTFNQQRGSYGKAAGDGGGIAPSNNSLSTARSFNKKSNNAQGGQSRLNPSQGNSTESNNASAARNISNGIHGQSHLHGAPDGPITKSSESSAGHKSTGIVPKAETATLPPLISDPVLPTSLAKGDDESKAFPFQFGSIVPGVINGMAIPARTCSAPPSFDKQKPDQALDDPDKSVSSDPIPPVPKQQKSHEKDAGVNEQSNVEIKDNKDSEVSILTSVNHMSKPFVAPVTGISVSTSYHQSQAPLQFGGANPQIQSHGMTTTSIQMPIPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISYSPQMGNQLGNMGIGIGCQYPQQKGGKFASPRKTTHVKITHPETHEELRLDKRMDAFSNGGSSCVRPHPNIPSQSQPVKSFPASHPVNYFPSNSYNTNSPYYPPNSLPLTGSPMTPNCQPTTFNFPLHHGPQGVSFMNSSSHGSSPTNKTSTPAGITSMTIKPNGTTSIVDSSLSNSCIADVQNGESPGSTISCDVSSSVLQKGSETCSEVSPQQSKFSSDFVTNVSNNEGGRESLAISNSLKDKKPGKKDQITQNQVSVLSPTMDSIRSGVVDQNISDIGVPDALGTKKNYSAAITIEDLPGSDTISTGVEVETNGSVEASAYVSVEGCGAQTIDKVHNQMPDKTYKLVEGNFGSSDLQSTDLPKTTLKHFKNDSENVDVESGTKDRPIIEPNKVKNQSKGKKKRREILQKADAAGSTSDLYNAYKGPGEKRGVLSSESKESVTSPLSLKQFDVGQSDIKASEKCDHNKVELDDWEDVADMSTPKLEVHDISQKVGEGHGSTTKKYSRDFLLKFVEQCIDLPEGFEITADIGALMNANIGGSHIFERDSHPNPGRAVGGLSRMDRRGDVIMEDDRWNRVSGSFRAGRGPEGTGGNSGFRYGHGGNFGVLRNPRAQTPLQYSGGILFGPMQSGGNQGGRNIPNGERWQRSASFQQRGLIPSPNQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEKVKEVNIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEERGERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIDEVHRDAAQERQSHAGRSNRGPGNNQSSRRNPIDFSPRVSSSNSQMGGLCGLPTQARGYGGSQDAQFEEQQSYEAKTLNLKSVSPAAQLQGSIISQNSYSDKIVSEELRDMSLSAIREYYRWVNPTTEPQYNLPRCARDEKELVLCIKDLNSPSFYPSMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTLSQVQLIKGFESVLCTLEDVVNDAPRAAEFLGRIFAKVIIERVATFTEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEQNQKKKGKDKEKLLKMLKREKYLLVIFVIFLPFFFACVDGKYFVLVHGAFHGAWCWYKVADQLKSEGQNVTTLDMAACGVNPKQTEEVDSVSEYHKPLITFLASLPPQEKVILVGHSLGGLSVSIAMEKYPQKISVAVFITAAVVTHNLTYLAFLQEANRRLGNDLVEQYFILDGNKAPILSSTGRIIQAIEKLTNDIFEKLTPYNLV 1731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01438 1731 MobiDBLite consensus disorder prediction 1240 1266 - -
Vian9g01438 1731 ProSiteProfiles MI domain profile. 1371 1499 IPR003891 -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 1267 1303 - -
Vian9g01438 1731 SUPERFAMILY ARM repeat 1014 1242 IPR016024 -
Vian9g01438 1731 Gene3D - 1018 1253 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 42 93 - -
Vian9g01438 1731 SMART if4_15 1018 1240 IPR003890 GO:0003723|GO:0005515
Vian9g01438 1731 Pfam alpha/beta hydrolase fold 1566 1688 IPR000073 -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 206 229 - -
Vian9g01438 1731 Gene3D alpha/beta hydrolase 1564 1725 IPR029058 -
Vian9g01438 1731 Coils Coil 1100 1120 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 703 726 - -
Vian9g01438 1731 FunFam Eukaryotic translation initiation factor 4G 1354 1546 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 1110 1136 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 1240 1317 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 1 145 - -
Vian9g01438 1731 Pfam MA3 domain 1391 1487 IPR003891 -
Vian9g01438 1731 Pfam MIF4G domain 1018 1240 IPR003890 GO:0003723|GO:0005515
Vian9g01438 1731 SUPERFAMILY alpha/beta-Hydrolases 1562 1674 IPR029058 -
Vian9g01438 1731 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 328 1536 IPR045208 GO:0003743
Vian9g01438 1731 MobiDBLite consensus disorder prediction 457 491 - -
Vian9g01438 1731 SMART ma3_7 1361 1490 IPR003891 -
Vian9g01438 1731 FunFam Eukaryotic translation initiation factor 4G 1018 1253 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 703 734 - -
Vian9g01438 1731 Gene3D - 1354 1551 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 748 769 - -
Vian9g01438 1731 MobiDBLite consensus disorder prediction 174 229 - -
Vian9g01438 1731 SUPERFAMILY ARM repeat 1359 1532 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01438 Vian-Chr9 30282470 30294093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01438 1336 1548 Eukaryotic Initiation Factors Gene Family AT3G60240 56.744 3.22e-62 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01438 K03260 - gmx:100798562 1953.33