Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01435 ATGGACCAAATGGATGATGACTCATGGCAACAATGGGTTTCGATTTTGGAGGAAAATGATTGGCATACTTTACGTGATTTTGACCTGAACTCTGCTGGAGAAGAATTTAAGGGGGACAATTCAGTGGTGCCTGCAGAAGACTCATTGAAAGAAAGCAGCACTACCCTTCTAAGCAATTTTCCATCTTTGGAAAAGAACACTGGCTTTGACATGACCAGTCTCACACAACAACATGATTCTCCACGACCAAAGTCTTGTGTTCTGTCATTTGAGAATTTCACTTCAGTGCCAATTTTTGATAAGAAAACATGCCAACATCTTGGTGAACACTCAAAGCAGACACAAGAAAAAACCAGAAAACCCCTCAAGAGGGAAAGAAACTCTTCTCAGACACTTGATCACATAATGGCTGAGAGAAAAAGGAGAGAGAATCTCACCAAAATGTTCATTGCCCTTTCTGCTCTTATTCCTGGCTTGAAAAAGGTGGACAAGGTTTCTGTTCTGAACAAGGCCGTAGAATACGTGAAGTGTCTTGAGCAGCGTGTGAAAGATTTGGAGAAAGAGAATAAGAAAAGGAAGATAGAATCAGAAGGGTGCTTGAAAGTGAGCAAAAGCAACATGGTTGGATATGACTTTTCGTGGACCTCTCATGCTTGTAATGATGGTGACGAAGCTAGCAAGAAATGTTCGAAGGTTGAAGCAAGAGTTGCAGGAAAAGATGTACTTATCAGAGTAACGTGTGAGATGCAAAGGAACATTGTGCAGAACGTAATGGCCAAGCTTGAAGCTCATAATCTCTCTGTTGTTAGCAGCAATGTTTTGCCTTTTGGGAATTCTGCTATCACCATTACCAGCATTGCTCAGATGAACCCTAAATTCACCACGACAGTTGACAACTTTGTGAAAACGTTGACTGAGGATTTGTCCAAGTGCTGTGACCTGCATTATTAA 951 0.4132 MDQMDDDSWQQWVSILEENDWHTLRDFDLNSAGEEFKGDNSVVPAEDSLKESSTTLLSNFPSLEKNTGFDMTSLTQQHDSPRPKSCVLSFENFTSVPIFDKKTCQHLGEHSKQTQEKTRKPLKRERNSSQTLDHIMAERKRRENLTKMFIALSALIPGLKKVDKVSVLNKAVEYVKCLEQRVKDLEKENKKRKIESEGCLKVSKSNMVGYDFSWTSHACNDGDEASKKCSKVEARVAGKDVLIRVTCEMQRNIVQNVMAKLEAHNLSVVSSNVLPFGNSAITITSIAQMNPKFTTTVDNFVKTLTEDLSKCCDLHY 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01435 316 Gene3D - 124 201 IPR036638 GO:0046983
Vian9g01435 316 MobiDBLite consensus disorder prediction 107 128 - -
Vian9g01435 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 194 IPR036638 GO:0046983
Vian9g01435 316 SMART finulus 135 184 IPR011598 GO:0046983
Vian9g01435 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 178 IPR011598 GO:0046983
Vian9g01435 316 Coils Coil 168 195 - -
Vian9g01435 316 PANTHER BHLH TRANSCRIPTION FACTOR 51 309 - -
Vian9g01435 316 Pfam Helix-loop-helix DNA-binding domain 134 179 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01435 Vian-Chr9 30256960 30259225 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01435 85 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.419 1.21e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vian9g01435 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01435 - - vun:114166535 451.055