Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01433 ATGGATGATGAATCATGGCAACAATGGGTTTCAATTTTGGAGGAAAATGATTGGCATACTTTACGTGATTTTGACCTGAACTCTGCTGGAGAAGAATTTAAGGGGGACAATTCAGTGGTGCCTGCAGAAGACTCATTGAAAGAAAGCAGCACTACCCTTCTAAGCAATTTTCCATCTTTGGAAGAGAACACTGGCTTTGACACGACAAGTGTCACACAACAACATGCTTCTCCACGACCAAAGTCTTGTGTTCTGTCGTTTGAGAATTTCACTTCAGTGCCAATTTTTGATAAGAAAACGTGCCAACATCTTGGTGAACACTCAAATCAGACCCAAGAAAAAACCAGAAAACCCCTCAAGAGGGAAAGAAACTCTTCTCAGACACTTGATCACATAATGTCTGAGAGGAAAAGGAGAGAGAATCTCACCAAAATGTTCATTGCCCTTTCTGCTCTTATTCCTGGCTTGAAAAAGGTGGACAAGGTTTCTGTTCTGAACAAGGCCATAGAATACGTGAAGTGTCTTGAGCAGCGTGTGAAAGATTTGGAGAAAGAGAATAAGAAGAGGAAGATAGAATCAGAAGGGTGCTTGAAAGTGAGCAAAAGCAACATGGTTGGATATGACTTTTCGTGGACCTCTCATGCTTGTAATGATGGTGACGAAGCTAGCAAGAAATGTTCGAAGGTTGAAGCAAGAGTTGCAGGAAAAGATGTACTTATCAGAGTAACGTGTGAGATGCAAAGGAACATTGTGCAGAACGTAATGGCCAAGCTTGAAGCTCATAATCTCTCTGTTGTTAGCAGCAATGTTTTGCCTTTTGGGAATTCTGCTATCACCATTACCAGCATTGCTCAGATGAACCCTAAATTCACCACGACAGTTGACAACTTTGTGAAAACATTGACTGAGGATTTGTCCAAGTGCTGTAACCTGTAA 936 0.4145 MDDESWQQWVSILEENDWHTLRDFDLNSAGEEFKGDNSVVPAEDSLKESSTTLLSNFPSLEENTGFDTTSVTQQHASPRPKSCVLSFENFTSVPIFDKKTCQHLGEHSNQTQEKTRKPLKRERNSSQTLDHIMSERKRRENLTKMFIALSALIPGLKKVDKVSVLNKAIEYVKCLEQRVKDLEKENKKRKIESEGCLKVSKSNMVGYDFSWTSHACNDGDEASKKCSKVEARVAGKDVLIRVTCEMQRNIVQNVMAKLEAHNLSVVSSNVLPFGNSAITITSIAQMNPKFTTTVDNFVKTLTEDLSKCCNL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01433 311 Coils Coil 165 192 - -
Vian9g01433 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 191 IPR036638 GO:0046983
Vian9g01433 311 Pfam Helix-loop-helix DNA-binding domain 131 176 IPR011598 GO:0046983
Vian9g01433 311 MobiDBLite consensus disorder prediction 103 127 - -
Vian9g01433 311 Gene3D - 120 198 IPR036638 GO:0046983
Vian9g01433 311 SMART finulus 132 181 IPR011598 GO:0046983
Vian9g01433 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Vian9g01433 311 PANTHER BHLH TRANSCRIPTION FACTOR 52 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01433 Vian-Chr9 30245268 30247572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01433 73 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.000 3.86e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vian9g01433 HLH 2.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01433 - - vun:114166535 450.669