Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01431 ATGAAGTGCTTTCACTATTTCAGAGATAAATCTAGAAACAGTAGGCAAAGGTCAGCACCTGAACTGAAGGAGAAAGAGAAAATGGACTTTTCAGGAGCTGAGAGGGTCACCAAGTCTTCAAGCTCATCTGCTTCACCCCGCGGTATACCAGAACTGTATGAGGAAAAGGGTCAGAATTTGAGGGTCTTCTCCCTCTCAGAGCTCAAGCGTGCAACAAGTGATTTCAACAGGCTTTTTAAGATAGGAGAAGGTGGATTTGGAAGTGTGTTTAAAGGTTCAATCCAGCCTGCTGATGGGAATGGAAATTCTGTTGTAGTTGCTATCAAAAGGCTTAACAAGGATGCATTACAGGGCCATAAGCAATGGTTGACTGAAGTTCAGTTTCTTGGTGTTGTGGAACACCCAAATCTTGTCAAGCTTATTGGATACTGTGCTTTGGACGACGAACGAGGCATCCAGAGACTACTCGTGTATGAATACATGCCGAACAAAAGCTTAGAGTTTCATCTTTTCAATAAAGCTTTTAATCCTCTTCCTTGGAAAACTAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAACTTATCTTCATGAAGAATTAGAAATTCAGGTGATATATCGAGATTTTAAATCTTCAAATATATTACTGGATGGAGATTTTAAGCCAAGGCTTTCTGATTTTGGACTTGCCAGGGAAGGGCCAGTAGCTGGTGATACTCATGTTTCAACAGCTGTGATGGGGACGTATGGTTATGCTGCTCCAGATTACATTGAGACAGGTCATCTCACAGCCAAGAGTGATGTGTGGAGTTTTGGAGTGGTTTTATATGAAATGCTTACTGGCAGGCGTTCAATGGAAAGAAACAGGCCTAAATCAGAGAAGAAACTGCTGGAGTGGGTGAAGCAATACCCTCCTGACAGCAAGAAGTTTGACACAATAATGGATCAGCGACTTCAAGGAGAGTATTCCAAGAATGGAGCAAGAAAACTCGCAAAACTCGCCGATCATTGCCTGCGTAAGAGCGCGAAAGATCGGCCAACGATGAGTCAGGTGGTGGAGAGACTGCAGCAGATAATGGAAGACACTGATGAGGCAGATGACAGAAGTGTTGAGGTATCAGAAAATGGTCAGGCTGAGGCTGAAGTGAAGGGAAATCAATTAAGGTCTTCAGAGTTGTGGAAAAAGAGGATGGAACATCTTGCAAAACTTGGTGAAAGTGTGGAGAGTGCTGGCAGAAAAAGATTTATGATCCTTCAGAGAGCCAATGTGTCCTCATAG 1281 0.4317 MKCFHYFRDKSRNSRQRSAPELKEKEKMDFSGAERVTKSSSSSASPRGIPELYEEKGQNLRVFSLSELKRATSDFNRLFKIGEGGFGSVFKGSIQPADGNGNSVVVAIKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDDERGIQRLLVYEYMPNKSLEFHLFNKAFNPLPWKTRLEIALGAAQGLTYLHEELEIQVIYRDFKSSNILLDGDFKPRLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKSEKKLLEWVKQYPPDSKKFDTIMDQRLQGEYSKNGARKLAKLADHCLRKSAKDRPTMSQVVERLQQIMEDTDEADDRSVEVSENGQAEAEVKGNQLRSSELWKKRMEHLAKLGESVESAGRKRFMILQRANVSS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01431 426 Gene3D Transferase(Phosphotransferase) domain 1 161 383 - -
Vian9g01431 426 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Vian9g01431 426 MobiDBLite consensus disorder prediction 1 33 - -
Vian9g01431 426 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01431 426 PANTHER OS01G0588500 PROTEIN-RELATED 33 359 - -
Vian9g01431 426 CDD STKc_IRAK 81 359 - -
Vian9g01431 426 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Vian9g01431 426 MobiDBLite consensus disorder prediction 363 386 - -
Vian9g01431 426 SUPERFAMILY Protein kinase-like (PK-like) 58 358 IPR011009 -
Vian9g01431 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Vian9g01431 426 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Vian9g01431 426 MobiDBLite consensus disorder prediction 1 50 - -
Vian9g01431 426 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 161 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01431 Vian-Chr9 30206869 30210439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01431 1 356 Glycoside Hydrolase AT3G07070 42.473 2.82e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vian9g01431 Pkinase 5.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01431 - - gmx:100784625 733.791