Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01382 ATGCCTGTCCTTGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTTCAGGTGCTATTTGACAAGCTGGATTCTCATCAAGTTCTCGGCTTCTTTCGTGGGAGAAATCTTGATGAGAAGCTACTGAAAAAGTTGAAGAGGAAGCTGATGGACGTCAATTCTGTGATAGATGATGCAGAACAAAAGCAGTTCACTAATTCATTGGTCAAAGATTGGCTTGATGAGGTTAGAGACGTCTTGTATGATGCAGAGGATCTGCTCGAGCAAATAGACTATGAATTCTCCAAGACAAAATTGGAAGCTGAATTCCAAACCAGCTCTAGCAAGGTACACAATTTTGAATCCAAGATCATAGCACTCCTAGATGATGTAGAATCTCTTTTTAACCAAAACATTGTTAAAGATCTCAAAATTTATACTGGCGTTAGATCTGGGTTGGGTAATAAGGTGGCGGAGAAAAAAGTTGAGTCAACGTCGTTGGTGGCTGAAGAGGTTATTTATGGCAGAAATGAGGACAAAGAAATTATCTTTACTTGGCTGAGATCTGACACTAATGATAATAAGCTGTCTATACTTTCTATTGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCTCAACATGTATACAATGATCCAAAGACAGAGGAAGCTAAATTTGATGAAAAGGCTTGGGTTTGCGTTTCTGATGCATTTGATGTTTTGAGAGTATCCAAAGCAATTATTGGAGCTTTCACTAACTCAAGAGATGACAGTGGAGACCTAGAAATGGTTCATGGAAAATTGAAAAAAAGGTTGTCTGAAAAGAAGTTTCTTCTGGTTCTGGATGATGTTTGGAACGAAGACCGAAATCAATGGAAAGCATTACAAACTCCTCTTACGTTTGGAGCTAAAGGAAGTAAAATTCTAGTCACAACACGCAGTCACAAAGTTGCTTCTATCATGCAGTCAACCTACATACTCCAACTAAAGCAATTAGGTGAAGATCACAGCTGGCAAACTTTTGCTAAACATGCATTCCAAGACGAAAACTGTAAGTTGAATTCTGAGTTAAAGAAGATTGGCATGAAGATAGTTGAAAAGTGCCAAGGATTACCTCTGGCCCTTGAAACAATAGGATGTCTTTTACGGTCAAAGTCATCTGTTTCAGAGTGGGAAGGTGTATTGACAAACGAGATATGGGGCTTACCAATAGAAGATAGTAAAATCGTTCCTACTTTGTTGTTGAGCTATTACCGTCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCATTATTCCCCAAAGACCATAGGTTTGACAAAGAGAGCTTAATTTTGTTATGGATGGCTCAAAATTTTCTACATTGCTCTCAACAAAGCAAGTCTCCAGAAGAAGTAGGTGAAGACTACTTCAATGATCTAGTATCAAGGTCATTCTTTAAACAAATAACTTGGGACCAGGAAATATATTTTGTCATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCAGGTGAAATCTGCCACAGGTTAGGTGTTGATGATGAAAAAAGAGTATCAAGGAAAACCCGTCATATATCATATGTAAGCGATCCTATTCAAGATTATACGAGTTTACGTGATGCTACATGGTTACGAACATTTATAACTTTTGGGTGGCGTCGTGAGCTGCCAATAGAAGAGTTAATCCCCAACTTTAAGTTCATACGGGTCTTATCATTGAGGTTGTGTTTTGAGGTGCCTGACACAATAGGCGATCTTATACATCTCCGTTCGTTGGATTTTTCGGGTAGCGCCATACGCAGACTTCCTGACTCAATCTGTTCACTCTATAACTTGCAAGAATTGAAACTAAATAATTGTATCGAATTGAAGGAGTTGCCCTTGACTTTGCATGAGCTTACCAATTTGCGCCGCCTAGAACTTATGGGAACTACTTTAACGAAGGGTCCAATCGGTTTAGGAAAGTTGAAGAATCTTCACGTGTGGATAAACAATTTTGCGGTTGGAAAAAGTAGTGAGTTCAGTATTCAACAGTTAGGAGAACTTCATTTTCATGGAGAGCAGCTGTCAATTCAAAATCTTGAAAATATCTCAAATCCGTATGAGACGAATTTGAAGAATGAAACACATATTGTGACGCTGAGCTTACAATGGAATTTAGCGCGGAACAATGACGATTCGGTAAAAGAAAGAGAAGTACTTGAGAATCTGCAACCTTCCATACATTTGAAGCACTTATCAATCGATGGCTATGGTGGCACACAATTTCCCCGTTGGTTATCCAATAATTCTCTATCGAATGTGGTGTCCTTAACCTTGAATAACTGTAAACATTGCCTACGGTTGCCTTGCCTTGGACTTTTGACATTTCTGAAGGACTTGAGAATTGATGGCCTTGATTGGATAGGAAGGATAGATGCTGATTTCTACGGGGATAGCTCTTCTGCATTTGCATCCTTGAAAAGGTTGAGCTTTATTGATATGAAGGAATGGGAAGAATGGCAGTGCGTGACGGGTGCTTTTCCAAGTCTTAAAAGTCTTTTTCTGGCGAATTGTCCCAAGCTGAAAGAATTGCCAAACATACTTTGTCATTTAAAGAAATTTATTATACACGAATGCGGCCAACTTGGGGCTCCGATCACCAGGGCCGTCGAGATTCAATGTGTGAATACGAGGCCAAACATATTTGATACCCTTGAATACTTGCCTTTTTCTTTTGGTCCAGGCATCAGTATTCCCATTAGCAATTGGTACCATTCCCTTGTAGAATTGAATATCAGAGATGATTGTGACTCTCTCACTACCTTTCCTTTAGATTTGTTCCCAAAACTCCGCGACCTTTATTTACTCAAGTGTCGCAATCTACAGATGATATCGCAGGGGCACCCTCACAATCGTTTGAAGAATTTGTTCATTGAAAAATGCTCTGAATTTGAATCATTTCCCAATGAAGGATTATTTGCACCTCAGCTAGTGTCATTGATTATTGCAGGATTGGAGAAATTGAAGTCAATGCCTAAATGCATGTCTGCCCTTCTTCCATCTCTTAATAATCTGTACATAAGCAATTGTCCAGCGCTGGAGTTGTCCGAGGAATGTTTGCCATCAAATGTAAAAGAAATGTTTGTCGAGAATTGCTCCAAAGTTCTGGCCTCCCTAAAGGGCGCTTGGGGAACCAACCCTTCCTTAAAAGTCTTGAACATTGGCAAGGTGGATTTGGAGTGTTTTCCGGGTGAAGGTTTGCTCCCACTTTCTCTTGGTCGTCTAGTAATACATGATTGTCCAAATCTTAAGAAACTGGACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGACATTGATTCTTCGTAACTGTCCTGTACTCCAATGCTTGCCAGAGGAGGGTCTACCAAAATCCATTTCAGAACTCAAAATGTCTGGTTGTTTATTGCTCAAACAGCGGTGCCAGAAACAATAA 3450 0.3994 MPVLETLGGALFGAVLQVLFDKLDSHQVLGFFRGRNLDEKLLKKLKRKLMDVNSVIDDAEQKQFTNSLVKDWLDEVRDVLYDAEDLLEQIDYEFSKTKLEAEFQTSSSKVHNFESKIIALLDDVESLFNQNIVKDLKIYTGVRSGLGNKVAEKKVESTSLVAEEVIYGRNEDKEIIFTWLRSDTNDNKLSILSIVGMGGMGKTTLAQHVYNDPKTEEAKFDEKAWVCVSDAFDVLRVSKAIIGAFTNSRDDSGDLEMVHGKLKKRLSEKKFLLVLDDVWNEDRNQWKALQTPLTFGAKGSKILVTTRSHKVASIMQSTYILQLKQLGEDHSWQTFAKHAFQDENCKLNSELKKIGMKIVEKCQGLPLALETIGCLLRSKSSVSEWEGVLTNEIWGLPIEDSKIVPTLLLSYYRLPSHLKRCFAYCALFPKDHRFDKESLILLWMAQNFLHCSQQSKSPEEVGEDYFNDLVSRSFFKQITWDQEIYFVMHDLLNDLAKYVSGEICHRLGVDDEKRVSRKTRHISYVSDPIQDYTSLRDATWLRTFITFGWRRELPIEELIPNFKFIRVLSLRLCFEVPDTIGDLIHLRSLDFSGSAIRRLPDSICSLYNLQELKLNNCIELKELPLTLHELTNLRRLELMGTTLTKGPIGLGKLKNLHVWINNFAVGKSSEFSIQQLGELHFHGEQLSIQNLENISNPYETNLKNETHIVTLSLQWNLARNNDDSVKEREVLENLQPSIHLKHLSIDGYGGTQFPRWLSNNSLSNVVSLTLNNCKHCLRLPCLGLLTFLKDLRIDGLDWIGRIDADFYGDSSSAFASLKRLSFIDMKEWEEWQCVTGAFPSLKSLFLANCPKLKELPNILCHLKKFIIHECGQLGAPITRAVEIQCVNTRPNIFDTLEYLPFSFGPGISIPISNWYHSLVELNIRDDCDSLTTFPLDLFPKLRDLYLLKCRNLQMISQGHPHNRLKNLFIEKCSEFESFPNEGLFAPQLVSLIIAGLEKLKSMPKCMSALLPSLNNLYISNCPALELSEECLPSNVKEMFVENCSKVLASLKGAWGTNPSLKVLNIGKVDLECFPGEGLLPLSLGRLVIHDCPNLKKLDYRGLCHLSSLQTLILRNCPVLQCLPEEGLPKSISELKMSGCLLLKQRCQKQ 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01382 1149 PANTHER DISEASE RESISTANCE PROTEIN RP 42 852 IPR044974 GO:0006952
Vian9g01382 1149 FunFam Probable disease resistance protein At1g63360 411 498 - -
Vian9g01382 1149 Gene3D - 17 128 - -
Vian9g01382 1149 Gene3D Ribonuclease Inhibitor 1036 1146 IPR032675 -
Vian9g01382 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 425 IPR027417 -
Vian9g01382 1149 Gene3D - 411 498 IPR036388 -
Vian9g01382 1149 Pfam Rx N-terminal domain 13 104 IPR041118 -
Vian9g01382 1149 Gene3D - 146 321 IPR027417 -
Vian9g01382 1149 Gene3D Ribonuclease Inhibitor 551 664 IPR032675 -
Vian9g01382 1149 Pfam NB-ARC domain 172 389 IPR002182 GO:0043531
Vian9g01382 1149 SUPERFAMILY L domain-like 892 1143 - -
Vian9g01382 1149 Gene3D - 325 410 IPR042197 -
Vian9g01382 1149 Gene3D Ribonuclease Inhibitor 665 873 IPR032675 -
Vian9g01382 1149 Gene3D Ribonuclease Inhibitor 891 1035 IPR032675 -
Vian9g01382 1149 SUPERFAMILY L domain-like 487 864 - -
Vian9g01382 1149 PRINTS Disease resistance protein signature 362 376 - -
Vian9g01382 1149 PRINTS Disease resistance protein signature 836 852 - -
Vian9g01382 1149 PRINTS Disease resistance protein signature 191 206 - -
Vian9g01382 1149 PRINTS Disease resistance protein signature 265 279 - -
Vian9g01382 1149 FunFam Probable disease resistance protein At1g61300 148 319 - -
Vian9g01382 1149 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01382 Vian-Chr9 29352382 29355831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01382 192 386 WRKY Transcription Factor Family AT5G45050 27.670 5.59e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01382 - - vun:114168932 1532.69