Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01367 ATGGTGAAGATGGTGCTGCATAGCCGGATTTTCAGTTACCATGTTGTTAGTTTCTTGTTGCTGATTAGTTGTGGCATGAACTATGGAACCGATACTGATATTTTCTGCCTACAAAGTATAAAAGATGCCCTTGAGGATCCCAATAACTATTTGAAGTTTTCTTGGGATTTCAACAACAAAACTGAAGGGTTCATATGTAGGTTTATTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAACTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAATTGCTCTAGCTTAACTGGGTTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGATATATCTACTCTTGTACCATTTGTGACCTCTCTTGACCTTTCTTCAAATGAATTTTCTGGGGCGATTCCGGTGACTCTTTCAAATTGCACCTTTCTCAATAGCCTTAGACTTGATCAGAACAGACTCACTGGTCAAATTCCTCTACAATTTGGTATTCTCCCACGGCTCAAGACCTTTTCTGTGTCTAACAATCTTTTGACGGGGCAAGTTCCAAGCTTTAACTCTTCAGTTTCAGTGAATTATGCAAATAATCAAGGCCTGTGTGGAGGTAATGGATTGGGGTCTTGCCAAGCCAAGAATTCTAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCAGGTGGGGTGACTCTTGCAGCATTAGGATTGGCTGTTGGAATGTTGTTCTTCGTGCGACGTGTTTCTGTCAAGAAGAAGGAAGAGGACCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACAAATTAAGGTTTCTATGTTTGAGAAATCAATCTCAAAAATGAAGTTGATTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGTCAGGAAGAACAGGAACTGTTTACAAAGCTGTGCTTGGTGATGGAACAACACTTATGGTAAAGAGATTACAGGAATCTCAGTACACTGAAAAGGAATTCATGTCTGAGATGGGTACACTAGGGACTGTCAAACATCGCAATCTTGTTCCTCTTTTAGGCTTTTGCATGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAACATGTCAAATGGCAATCTCCATGACCAACTCCATCCTGCAGATGGTGTGAGCACCCTTGACTGGACTACAAGACTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAACCCCCGAATCATCCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGATGCAGAATTTGAGCCAAAAATTTCTGATTTCGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTGGGTTATGTTGCTCCAGAGTACACAAGAACTTTGGTTGCTACACCCAAGGGGGATGTTTATAGCTTTGGGACTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCCACCAATGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATCTGGTAGAATGGATCACAGAGCTAACAAACAAAGGAAAACTCCATGATGCCATTGATGAATCATTAGTCAGCAAGGATGTTGAAAGTGAGCTTTTCCAATTTCTGAAGATTGCATGCAACTGTGTTCTGCCAACTCCAAAGGAGAGGCCAACCATGTTTGAAGTGTATCAGTTTTTAAGAGCCATTGGAGCTAGATACAATTTCACAACTGATGATGAGATATTGGTACCTACTGATAATGGTGATGCTGATAACATGGAGGAACTTATTGTAGCTCGGGAATGA 1842 0.4153 MVKMVLHSRIFSYHVVSFLLLISCGMNYGTDTDIFCLQSIKDALEDPNNYLKFSWDFNNKTEGFICRFIGVECWHPDENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPGDISTLVPFVTSLDLSSNEFSGAIPVTLSNCTFLNSLRLDQNRLTGQIPLQFGILPRLKTFSVSNNLLTGQVPSFNSSVSVNYANNQGLCGGNGLGSCQAKNSKSNMAVIAGAAAGGVTLAALGLAVGMLFFVRRVSVKKKEEDPEGNKWARSLKGTKQIKVSMFEKSISKMKLIDLMKATNNFSNTNIIGSGRTGTVYKAVLGDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMAKKERLLVYKNMSNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWITELTNKGKLHDAIDESLVSKDVESELFQFLKIACNCVLPTPKERPTMFEVYQFLRAIGARYNFTTDDEILVPTDNGDADNMEELIVARE 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01367 613 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vian9g01367 613 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Vian9g01367 613 Pfam Protein tyrosine and serine/threonine kinase 307 578 IPR001245 GO:0004672|GO:0006468
Vian9g01367 613 ProSiteProfiles Protein kinase domain profile. 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01367 613 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 49 195 - -
Vian9g01367 613 Gene3D Ribonuclease Inhibitor 31 220 IPR032675 -
Vian9g01367 613 SUPERFAMILY L domain-like 32 199 - -
Vian9g01367 613 SUPERFAMILY Protein kinase-like (PK-like) 281 578 IPR011009 -
Vian9g01367 613 CDD STKc_IRAK 310 578 - -
Vian9g01367 613 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 379 599 - -
Vian9g01367 613 Gene3D Transferase(Phosphotransferase) domain 1 379 595 - -
Vian9g01367 613 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 265 378 - -
Vian9g01367 613 Gene3D Phosphorylase Kinase; domain 1 265 377 - -
Vian9g01367 613 FunFam Nuclear pore complex protein NUP107 30 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01367 Vian-Chr9 29129014 29131305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01367 16 592 Receptor kinase-like Gene Family AT3G28450 47.179 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vian9g01367 PK_Tyr_Ser-Thr 6.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01367 - - gmx:100305365 971.074