Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01349 ATGGAATTTGAGTCAGAGGAAGCTGCTAAGAACTTTTATGAGAAATATGCAAAACATGAAGGGTTTGTTGTTCGCCTTGATCGCTGCCACCGTTCTGAGGTTGACAACCGAATCATTTCACGCCGTTTTTCATGCAATAAGCAAGGTTTTCATGTGAGGGTTAGAAATAAAACCAAGCCTGTTCATAAACCAAGGACTAGCATAAGAGAAGGTTGTGAAGCCATGATGTTGGTTAAAGTTAATAAATGTGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAGCACAGTCATCTACTAAATGCTTCTGGTTCTCCTTCATATAGTAAAATGATTGAGTCAAAGGATAGGATAATTCAACAACTCACAAAGGAACTTGAGTACCGAGATCGATTATGTCAGCAATATCGCAGACAGCTATTCTCCCTTCTGGAGACTGTTGAGGAACAAACAGAAAGTTTATCAAAAAATGTTGAGCTTGTTGTTAACAATATAAGAAATCTTTAG 504 0.381 MEFESEEAAKNFYEKYAKHEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKTKPVHKPRTSIREGCEAMMLVKVNKCGKWVVTKFVKEHSHLLNASGSPSYSKMIESKDRIIQQLTKELEYRDRLCQQYRRQLFSLLETVEEQTESLSKNVELVVNNIRNL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01349 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 163 - -
Vian9g01349 167 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
Vian9g01349 167 Coils Coil 143 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01349 Vian-Chr9 28745654 28747481 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vian9g01349 FAR1 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01349 - - var:108347130 338.576