Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01343 ATGTGTAGGGATTCTTCACTCTTCTTTTTCGCTATCTCTCTCTCTCTCTCCAATGTTGGATCCATCGCTCTCGACCACCGACACACTGAGAAAAATGCCACTGCTGGCGGCCACTTCTGTGTGCTCCGCCGCTTGATCTTCGATGCCGTCAGCTGCGGCGGCACCTCCCGCTACCGCTATCGCCAGCGTGGCGGCGGCGAAGGAAGCGTTGGTGACTTTAGTTCGGTGGCTAGTCATGCAGAGAAGGAGGAGAGGTCGGAGAAGAGGTCGGAGAAGCTGTCGGATCTGCTGAACGCGGCGGAGACGAAAACGGATGCGGAGGTGGAGAGGAAGGAGGAGGCATTGGCGGAGCTGAAGCGAGTGGTGAAGGAGTTGCGCGAAGAAGACTTCTCGATGCGGAGAATCGCGGCGGAGAGAGTGAGGTCGCTGGCGAAGGAAGATGCCGAAGCGAGAGCGAATCTCGCAATGCTCGGAGCAATTCCTCCTCTCGTCGGAATGCTCGATTCGGAAGACGCTCATTCGCAAATCGCTTCGCTCTATGCTTTGCTCAATCTCGGAATCGGCAACGATGCAAACAAAGCGACTGTAGTGAAAATCGGCACTGTACACAAGATGCTGATGCTGAAACTAATTGAATCGAGTGAATCAAATTCGTCGGTGGCCGAAGCGATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGATTCGAATAAACCGATAGTAGGTTCCTCCGGTGCAATACCGTTCCTTGTTAGCACCCTAAAAAATTTAGAGGCTAGTAAAACCGTATCACAATCCCAATCGCAAGTGAAGCAAGATGCTCTGCGCGCTTTGTACAATCTTTCAATATGTCAGAGCAACATTTCGGTTATTCTGGAGACTGATTTGGCTTGGTTTTTAGTGAGCGCGATAGGGGACATGGAAGTGAGCGAGAGGAGTCTGGCGATTCTGAGCAATTTAGTGTCGACTCCGGAGGGAAGAAAAGCGATAAAATTGATATAG 1002 0.514 MCRDSSLFFFAISLSLSNVGSIALDHRHTEKNATAGGHFCVLRRLIFDAVSCGGTSRYRYRQRGGGEGSVGDFSSVASHAEKEERSEKRSEKLSDLLNAAETKTDAEVERKEEALAELKRVVKELREEDFSMRRIAAERVRSLAKEDAEARANLAMLGAIPPLVGMLDSEDAHSQIASLYALLNLGIGNDANKATVVKIGTVHKMLMLKLIESSESNSSVAEAIVANFLGLSALDSNKPIVGSSGAIPFLVSTLKNLEASKTVSQSQSQVKQDALRALYNLSICQSNISVILETDLAWFLVSAIGDMEVSERSLAILSNLVSTPEGRKAIKLI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01343 333 MobiDBLite consensus disorder prediction 61 92 - -
Vian9g01343 333 MobiDBLite consensus disorder prediction 77 92 - -
Vian9g01343 333 Gene3D - 81 332 IPR011989 -
Vian9g01343 333 SUPERFAMILY ARM repeat 117 326 IPR016024 -
Vian9g01343 333 SMART arm_5 147 187 IPR000225 GO:0005515
Vian9g01343 333 SMART arm_5 234 283 IPR000225 GO:0005515
Vian9g01343 333 SMART arm_5 284 322 IPR000225 GO:0005515
Vian9g01343 333 Coils Coil 83 128 - -
Vian9g01343 333 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 40 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01343 Vian-Chr9 28647390 28648975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01343 108 327 U-box Gene Family AT1G67530 34.361 1.25e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01343 - - gmx:100818576 456.832