Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01319 ATGGGCGACGGCGAAAGCACCTCCGATCGGTCGCTTAATTTCGAGGACATGACAGTGGTCTCCGCCGTGGGGCGCGGCGCCAAAGGCGTGGTGTTCCTGGCTCGCGCCGGTGGCCGGCGGTCGGGAGAGTGCGTGGCACTGAAAGTGATGTCGAAGGCGCTGATTGCGCAGAAAAGAACGAGAAAGAAGGACGAGGAGGAGTACGGGAGAGTGTCGTTTGAAGAGGAAGTGCTCCGTCGTTTCGATCATCCGCTCTTGCCGAGGCTTAGAGGCGTTCTTGAAACGGAGAAAGTGATTGCGTTCGCCATCGATTACTGCCATGGTGGCACGCTCCACTCTCTCAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGACACCATCAGGTTTTACGCTGTAGAATTGGTGCTTGCATTGGAATATTTACACGAAATGGGAATAGTGTACAGAGATTTGAAGCCAGAAAATGTGATGATTCAAGAAAACGGCCACATAATGCTTGTCGATTTTGATCTCTCCAAAAAGCTAAACCCTAAATCCCCTCACTCACTGAGTCAAAACTCGACCCCGAGTCCTAACTCGGAGAAACGTTCAAGGAAACAACAACGATTAACTCGTATATACAGTTTTTGTAACTCCGGCATCTCGCCGTGGGACTCGGACTCGGAGCCCCCGCTAAGTACAGTCGACTCAGTGCGTCGCACGGAGTCTGACTCGGTTGAGAAATCAAACTCGTTCGTTGGAACAGAAGAATACGTGGCACCCGAAATCTTATCAGGGAAAGGTCACGGTTTTAGCGTTGATTGGTGGTCATACGGCATCTTGTTGTACGAGATGCTGTACGGAACGACGCCGTTTAAAGGCTTAAATAGGAAGGAAACGTTTTACCGGATCTTAACTAAAGAGCCAGAGTTAACGGGAGAGAAGACGGCGTTACGGGATTTAATTTCAAGATTGTTGGAAAAAGATCCTGACCGTCGGATCCCAGTGGAGGAGATCAAAGGCCACGATTTCTTCAAAGGGGTTAAGTGGGACAAAGTGTTGCACATTGCAAGACCACCTTATATTCCTACAAATGAGGTTGAGAACAAAGTGGGGTTTAGCAAAAACGACGTGGAAGTGTTTGTGAACGAAGTGTTTTTTCCCACGAATGATGATGATGGCGTAGAGAATCCTGAGCATAACAAGAAGAATGACGATTTTTTAATTTTTTAA 1215 0.4815 MGDGESTSDRSLNFEDMTVVSAVGRGAKGVVFLARAGGRRSGECVALKVMSKALIAQKRTRKKDEEEYGRVSFEEEVLRRFDHPLLPRLRGVLETEKVIAFAIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHEMGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNPKSPHSLSQNSTPSPNSEKRSRKQQRLTRIYSFCNSGISPWDSDSEPPLSTVDSVRRTESDSVEKSNSFVGTEEYVAPEILSGKGHGFSVDWWSYGILLYEMLYGTTPFKGLNRKETFYRILTKEPELTGEKTALRDLISRLLEKDPDRRIPVEEIKGHDFFKGVKWDKVLHIARPPYIPTNEVENKVGFSKNDVEVFVNEVFFPTNDDDGVENPEHNKKNDDFLIF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01319 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Vian9g01319 404 SMART serkin_6 17 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01319 404 FunFam Serine/threonine-protein kinase OXI1 241 358 - -
Vian9g01319 404 MobiDBLite consensus disorder prediction 219 233 - -
Vian9g01319 404 MobiDBLite consensus disorder prediction 219 241 - -
Vian9g01319 404 Pfam Protein kinase domain 241 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01319 404 Pfam Protein kinase domain 19 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01319 404 ProSiteProfiles Protein kinase domain profile. 17 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01319 404 Gene3D Phosphorylase Kinase; domain 1 16 109 - -
Vian9g01319 404 MobiDBLite consensus disorder prediction 178 195 - -
Vian9g01319 404 SUPERFAMILY Protein kinase-like (PK-like) 18 362 IPR011009 -
Vian9g01319 404 Gene3D Transferase(Phosphotransferase) domain 1 239 358 - -
Vian9g01319 404 FunFam Serine/threonine-protein kinase OXI1 110 178 - -
Vian9g01319 404 PANTHER FLIPPASE KINASE 1-RELATED 10 364 - -
Vian9g01319 404 ProSiteProfiles AGC-kinase C-terminal domain profile. 340 404 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vian9g01319 404 MobiDBLite consensus disorder prediction 178 201 - -
Vian9g01319 404 Gene3D Transferase(Phosphotransferase) domain 1 110 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01319 Vian-Chr9 28209661 28212272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01319 1 380 AGC Kinase Gene Family AT3G25250 58.854 2.70e-152 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vian9g01319 Pkinase 2.1e-33 CL0016