Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01312 ATGGAGATACGTAGCATTGAGATGGGAAAATGTATGATTAGGGAAAAACTTTCTGGGAAAAAATTGCTCATTGTACTTGACGATACTAAATTTGATCCATTATTAGACCTATGCGATAGTCATGTATGGTTCGCTAAAGGAACTGTCATAATAATTACAGCAAGAGAAGAAAGCTTACTAAGGATACCTCAGATTGGTTCTGTTTTTTCGATAAATCTGTTGAGCACAAATGAGTCCCTTGAACTTCTTTGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACAATGACCTTGCAGAAAGAGTAGCTGTTCATTGTGGAGGACTACCTCTTGCTCTTGAAGTCATTGGAAGTAGTTTATATGAAAGGACGAAAGAAGAATGGAAGATTGTATTGTTAGAATTAAAGAAAATTTACAAACATGATGTCCATCGGAAATTGAAAATAAGCTTTGATGGTTTACGCAATGAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAGGCAGAGCCTTTGTTACAAAGATCCTAAATGACTGTGGAGTAGATGCTGATAGTGGAATAAGAATTCTCATAGAGCGTGGCCTCATACAAGTGAAAAAGAACAACAAATTAGGAATACAACCGATGCTACAAAAAATGGGAAGAAAAATTATTCGTCAAATTTCAGGAAAGGAACTTGGGAAGAACCCTCGACTACGGTTTGGCCAGGATGCAGAATATGAACTGTTAGAGAATACTCTCTTCTCATCCAAGCAGACAAAAGTCATTCGGAGATTGCCTTTGAAAATAAACCCTAAACCTTTGAAAATGTTTTTAATAGCCACAAGAGAGTTATTCGAACATCCTTCGGTAGTAAGAGACAAATCAAGACTTCTGAAACTCACTAGAGATTTTGGGAAACTGAGATGGATCAGTTTGCAAGGGTTTTCTTCAGAATACCTACCTGAAGACTTTTATTTGCAAGATGCAATGGTGATTGATTTAAAACACAGTCTTCTTCGATTCGTCTGGAAAGAACCTCAGGTTTTGAAGTGGTTAAAAGTCCTTAATCTTAGTCACTCCATGTACTTGAGAGAAACTCCAGACCTTTCCGGACTACCACGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGCGCAAAGTACACCATTCTATTGGATGTCTCAACAATCTTGTATTGCTAAATTTGAAGGACTGTACAAGTCTGAGCAATCTCCCAAGAGAGGTATATAAGTTGAAATCTTTAAACACTCTCATTCTCTCTGGTTGTTTGAAGATTGACCCGTTGGAAAAATATATAGTGGAAATGGAATCCTTGATAATTCTAATTGCTGAAAATGCAGCTGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATTTCTACGTGGTTTAGAGGGATTGTCATGTAATATTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAATAATGAATCCCTTATCTTATATTCATTCGTTTTGCATGGATATTGAGGATAATGGTTGGAATGATTGTTTGCCATTGCTTAGCACCCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATGTAAGCAAGTTGAAACTATTCTGATCGAATATGGAGTAAATGTTACAAAATCAGGAATTTCAGAGAAGAACTTAAAGTATTCTTTGATTGGTGTTGGAAGATGCAAGGATTTCTTCGATGCTGTCAGTGATAGCATTTCTAAGGTATTTGCAAGCAATGAGTCACGTGATGTTTCTCTCCCAGGTGATAATGATCCTTATTGGTTGGGTCACATGGGTAAGGGTCATTCTGTTTCTTTCACTGTGCCTCGAGATCGTGACTTGAAGGGAATGGCTTTGTGTGTCGTTTATTTATCAACCCCTGAAATTGTGGCAACTGAATGTCTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGTACATTGCAAATACATAACCATGGCACGGTAATTTCCTTTAATGATATAGATTGGCAAGGTATAATATCAAATTTAGGATCAGGAGACAAGGTTGAGATTTGTGTGACTTTTGCTCATGAATTGGTAGTCAAGAACATAGTTGTCTATCTGATATGTAGTGAATTAAACGATTCACAAAAGGAGCCTGCGCCAAAGAAAAATTCCCTAGTTAGAATTATAAAGAAAGTTGTAATGTGA 2229 0.3652 MEIRSIEMGKCMIREKLSGKKLLIVLDDTKFDPLLDLCDSHVWFAKGTVIIITAREESLLRIPQIGSVFSINLLSTNESLELLCWHAFREAKPKEEYNDLAERVAVHCGGLPLALEVIGSSLYERTKEEWKIVLLELKKIYKHDVHRKLKISFDGLRNEMEKDLFLDVCCFFVGKGRAFVTKILNDCGVDADSGIRILIERGLIQVKKNNKLGIQPMLQKMGRKIIRQISGKELGKNPRLRFGQDAEYELLENTLFSSKQTKVIRRLPLKINPKPLKMFLIATRELFEHPSVVRDKSRLLKLTRDFGKLRWISLQGFSSEYLPEDFYLQDAMVIDLKHSLLRFVWKEPQVLKWLKVLNLSHSMYLRETPDLSGLPRLEQLILKDCPRLRKVHHSIGCLNNLVLLNLKDCTSLSNLPREVYKLKSLNTLILSGCLKIDPLEKYIVEMESLIILIAENAAVKQVPFSIVSSKSIGYIFLRGLEGLSCNIFPSIIRSWMSPIMNPLSYIHSFCMDIEDNGWNDCLPLLSTLANLRSVLVQCDTEFQLCKQVETILIEYGVNVTKSGISEKNLKYSLIGVGRCKDFFDAVSDSISKVFASNESRDVSLPGDNDPYWLGHMGKGHSVSFTVPRDRDLKGMALCVVYLSTPEIVATECLRSVLIVNYTKCTLQIHNHGTVISFNDIDWQGIISNLGSGDKVEICVTFAHELVVKNIVVYLICSELNDSQKEPAPKKNSLVRIIKKVVM 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01312 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 167 IPR027417 -
Vian9g01312 742 Gene3D Ribonuclease Inhibitor 296 462 IPR032675 -
Vian9g01312 742 Pfam NB-ARC domain 10 139 IPR002182 GO:0043531
Vian9g01312 742 Gene3D - 73 157 IPR042197 -
Vian9g01312 742 SUPERFAMILY L domain-like 298 552 - -
Vian9g01312 742 SUPERFAMILY "Winged helix" DNA-binding domain 145 230 IPR036390 -
Vian9g01312 742 PRINTS Disease resistance protein signature 16 30 - -
Vian9g01312 742 PRINTS Disease resistance protein signature 396 412 - -
Vian9g01312 742 PRINTS Disease resistance protein signature 108 122 - -
Vian9g01312 742 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 450 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01312 Vian-Chr9 28091264 28094083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01312 324 531 WRKY Transcription Factor Family AT5G45050 28.365 8.08e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01312 - - vun:114165123 922.539