Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01310 ATGGGAGGATCTGGTAAAAGTACCATTGCTAAAGTCATCTACAATAAACTTCATCGTTTATTCGAGAATAAAAGTTTCATCGAAAATATTAGAGAAGTTTGTCAAACAGATAGAAGAAGAGGGCTTGTTCGTTTGCAGGAAAAACTTCTTTCTGACATCCTGAAAGTAAAGGTGGAGATACAAAACATTGGTATCGGACAAGGTATGATTGACAACAGATTTATTGGAAAAAGGGCGCTCATTGTTCTTGATGATGTGAATGAGTTTGACGAACTAGAAGCACTATGCGGAAATACTCAGTGGATGGGTGAAAGAAGCGTAATAATCATTACAACTAGAGATCTGCATTTACTCAAGAAATTTGAAGTTAATTATGTTCATGAAATGAAGGAAATGGAAGCAAATGAGTCCCTTGAACTTTTTAGTAGGCATGCGTTCAGAGAAGCAAAACCAAGAGAAGATTTCAATGAACTTGCAAAAGGTGCAGTTTCTTATTGTGGTGGACTACCTCTAGCTCTTGAAGTTCTGGGTTCTTATTTGAGTAATAGGACAATGACTGAGTGGAGAAGTGTGTTGTCAAAACTAAAAATAAGTCCCAATACCCAAGTCCAAGAGAAACTAAGGATAAGTTTTGACAATTTATGTGATCAAATGGAAAAAGAAATATTTCTTGATGTATGTTGTGTTTTTATTGGTAAGGAAAGAGGCTGTGTCACGGAGGTACTAAATGGCTGTGGACTATATGCTGATATTGGAATAACTGTCCTGTTAGAGCGTGGCCTCATAAAAGTCGAAAAGAACAATAAACTCAGAATGCATCATTTGCTACAAGACATGGGAAGAGAGATTATTCGTGAACTTTCAAGAAAAGAACCTGGGAAGCGCAGTAGATTATGGTTACAAGAGGATGTCCGTGATGTATTGACAAATAGTACCGGGACAGATGCTGTTGAGGGACTGGCTCTGAAATTGAATTTAAACAACAGAGAATGCTTTAAAGCTGATGCTTTTGAGGAAATGAGGAGTTTGAGACTGTTGCAACTTCATCATGTAGAACTCATGGGAGATTATGGCCATCTTTCTAAGCAATTGAGATGGATCTATTGGCAAGGGTTTCCTTCAAAGCACATACCTGACAACTTTTATCTGGAAGATGCAATTGCAATTAATTTCAAACACAGTAATCTTAGACAAGTGTGGAAAGAACCCAAGGCTTTGTTGATGTTAAAGTTCCTCAATCTTAGTCATTCCAAGTACTTGACTGAAACTCCTGACTTTTCTGGTCTACCATATCTTGAAAAGCTGATTCTCAAATACTGTCCAAGTTTGCGCTGTGTACACAAGTCCATTGGAGATCTCTGTAATATTGTGTTGATAAATTTGAAGAATTGTACAGGCCTTAGCAGTCTTCCAAGAGAGATATATAAGTTGAAATCTTTGAAAACTCTCATCCTATCTGGTTGTAAGAAGATTGACAAATTGGAAGAAGATATAGCGGAGATGAAATCCTTGACAACTCTAATTGCTGAAAATGCTGTTGTGAAAGTTCCCTTTTCAATAGTAAGCTCCAAAAGCATTGGATATCTCTTTCCATGTGGGTTTGAAGGATTCTCCCATGATGTTTTACCATCTATTATTTGGTGCTGGTTGTCACCGACAATGAATCCCCTGTCTCGTATTCTTCCGTTATGTGGCATATCATCATCTCTAGTTTCCATGAATATGCAAAACATTGATTTGGGTGACCTAGCACCGATTCTTACCAACCTTTTAAATCTTCGAAGTGTTTGGGTGCAATGTGACACGGAGTTTCAAATAACTAAACAAGTAAGAAAAATTTTGAATGACGTACGATGGGTACATTTCACTGAGTTAGGACTAGCATCCTGTACATCAGAAATTTCAGACAATTCCTTGAGATCTTATTTGATTGGAATTGGAAGCTACAAAGAAGAAGACTTCAATACTCTTAACAAGAGCATATCTAAGGAATTGGCAACCAGTGGATCTTGTCATGTTTTTCTGCCAGGAGGCAATTATCCTTTTTGGTTGGCTCATACGGGTGAGGGACATTCAGTGTATTTCACTGTGCCTCAGGATTGGGAAATTAGGGGAATGGCTCTGTGTGTTGTGTATTTAGCAACACCTGAAACAGTAGCAACTGAGTGTCTTATTAGTGTAGTAATGGTTAATTACACAAAGTACACCATCCAGTTATACAAGCGAGACACAGTCATTTCCTTTAATGATGCAGATTGGCAGGGCATAATATCTCATTTGGAAGCTGGAGACAAGGTGGAGATTTTTCTGTCTTTTAGGAATGAATTGGTGATAAAAAACACAGCCGTCTATCTCATAAATTATGAATTCATTGACATGGAAGTGAAAGCTGTTAGTAATCCACCTGTTATGAAGGTTTATAGCAGGAAGAGGAATCTTAAGGATCAAGAAAGCAGCCGGAAGAGACAATGGTAA 2475 0.3778 MGGSGKSTIAKVIYNKLHRLFENKSFIENIREVCQTDRRRGLVRLQEKLLSDILKVKVEIQNIGIGQGMIDNRFIGKRALIVLDDVNEFDELEALCGNTQWMGERSVIIITTRDLHLLKKFEVNYVHEMKEMEANESLELFSRHAFREAKPREDFNELAKGAVSYCGGLPLALEVLGSYLSNRTMTEWRSVLSKLKISPNTQVQEKLRISFDNLCDQMEKEIFLDVCCVFIGKERGCVTEVLNGCGLYADIGITVLLERGLIKVEKNNKLRMHHLLQDMGREIIRELSRKEPGKRSRLWLQEDVRDVLTNSTGTDAVEGLALKLNLNNRECFKADAFEEMRSLRLLQLHHVELMGDYGHLSKQLRWIYWQGFPSKHIPDNFYLEDAIAINFKHSNLRQVWKEPKALLMLKFLNLSHSKYLTETPDFSGLPYLEKLILKYCPSLRCVHKSIGDLCNIVLINLKNCTGLSSLPREIYKLKSLKTLILSGCKKIDKLEEDIAEMKSLTTLIAENAVVKVPFSIVSSKSIGYLFPCGFEGFSHDVLPSIIWCWLSPTMNPLSRILPLCGISSSLVSMNMQNIDLGDLAPILTNLLNLRSVWVQCDTEFQITKQVRKILNDVRWVHFTELGLASCTSEISDNSLRSYLIGIGSYKEEDFNTLNKSISKELATSGSCHVFLPGGNYPFWLAHTGEGHSVYFTVPQDWEIRGMALCVVYLATPETVATECLISVVMVNYTKYTIQLYKRDTVISFNDADWQGIISHLEAGDKVEIFLSFRNELVIKNTAVYLINYEFIDMEVKAVSNPPVMKVYSRKRNLKDQESSRKRQW 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01310 824 Gene3D - 132 215 IPR042197 -
Vian9g01310 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 225 IPR027417 -
Vian9g01310 824 Gene3D - 1 127 IPR027417 -
Vian9g01310 824 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 526 IPR044974 GO:0006952
Vian9g01310 824 Pfam NB-ARC domain 1 207 IPR002182 GO:0043531
Vian9g01310 824 SUPERFAMILY L domain-like 271 598 - -
Vian9g01310 824 Gene3D Ribonuclease Inhibitor 320 516 IPR032675 -
Vian9g01310 824 PRINTS Disease resistance protein signature 166 180 - -
Vian9g01310 824 PRINTS Disease resistance protein signature 475 491 - -
Vian9g01310 824 PRINTS Disease resistance protein signature 73 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01310 Vian-Chr9 28068508 28072216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01310 1 492 WRKY Transcription Factor Family AT5G45050 30.948 7.78e-62 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01310 - - gmx:100798685 1081.24