Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01309 ATGGACGTGGCTTCTTCTCTTTCGATTTTCTCAAATTTTAGAGTCTCAGGCGAGGTTTTCATCCATTGTTTGGGGGACGACATCCATAGAAATTTCGTTTCACATCTGAGTTCTTCCCTTCTACAGGCTGGAGTAAAACATTCCCTAGTTTCTGCGGAAATGCTGTCGGAAAAATTTATGCCATCAATTACAAGGTTTCAGATTGGAATAGTTGTTTTCACCAAAGCATACATTGAATCTTATCGGTGTGTTGAAGACCTTCTGAGAATCATTGAATGTCACGAAAATCACGGCCTAATAGTTATGCCCGTGTTTTACGATATTGACCCATCCGATCTACCTGATCTCAAAATGGAGTCATCCTATGTACGCGATCCGATAACGGGTGGATTCAAAAAGAATCCGAAAGTATGGAGCGTAAAGACGACCGTAAAGGTGACTCAGATGGAGACCGAAAGATTCAACTATCCATTCATACTATACACTTCTGCGGGGAGTCACGCAGTCAACAGGGTTGCAAATTTGCCTACTTGGGATGAGAGCAAACACAGGGATGATGCTGAACTAGTGGAGGAAATTGTTAAGTCTGTTCTCGCTAAACTAGACCGCGCCTTTCCTGTAACTAAATTTTCTGTTGAATTAGAAACCCACGTGAAAAATGTGATTGGATTGTTTGAAAATCAACCCATCGAAGTCTGTAGGATAGGGATATGGGGAATGGGAGGATCGGGTAAAACTACCTTAGCGAAAGCCATCTACAATAAAATTCCTTTTACATTTGGTGATAAAAGTTTCATTCAAGATATTAGAAAGGTTTGTCAAACAGATGGCAGAAGAGGCCTTGTTCAATTACAAAAGCAACTTCTTTCAGATGTCCTTAAATATGTGAAAATAGAGAGTGGTGAGATGGAAAAAACTACGATCGACCGTCTTTCTGGAAAAAAGTTGTTCATTGTGTTTGACGATGTGAATGGGATAGACCAACTAAAACACCTATGTGGAAACGGTATAAGGTTGGGTGCGGGAAGTGTAATAATCATTACGACTAGACATTTAGACCTGCTGTATCAACAAAAAGTTGATTATGTTTATGAGATGGATGAACTGGACGAACATGACTCGGTTGAACTTTTTAGTTGGCATGCTTTTAGAGAAGCAGAACCAAGAGAAGACTTCAATAAACTTGCAAGATCAGTCATTGCTTATTGTGGTGGACTACCACTGGCTCTTGAAGTCCTTGGTTCTTATTTAAGTAAGAGGTCAGAGAATGAATGGAGAAGTGTATTATCAAAACTAGAAAAAATTCCCAATACTCAAGTTCAGAACATCCTAAGAATAAGCTTTGACGACTTATGTAATGAAATGGAAAAGGATATATTTCTTGATGTATGCTGTTTCTTTATTGGTAAAGATAGAGAGTATGTCACGGAGATACTAAATGGCTGTGGACTACATGCTGATATTGGAATAAAAATTCTTATAGAACGTGGTCTTTTAAAAATTGAAAAGAACAATAAACTTGGAATGCATCATTTGCTTCGGAACATGGGACGAGAGATTGTGCGTCAAACTTCAACAATGCAACCTGGAAAGCGCAGTAGATTATGGGTTCCCAAGGATGTACTTGATGTATTGACAAAGAATACTGGGACAGAAGCTATTGTGGGATTGTCTCTGAACGGTAAGTTAACAAACAGTGATTCCTTCAAAGCTGATGCTTTTAAGGAAATGAAGAAGTTGAGATTCTTGCAACTAGATCATGTACGGCTGACTGGAGATTATGGGTATCTTTCTAAGCAACTGAGATGTATCTCCTGGCATGGATTTTCTTTAGAGCACATACCTAACAACTTTTACTTGGAAGGTGCAATTGCGATGGATTTCCAGCACAGTAATCTCAGACTACTGTGGAAAGAACCCACGGTTTTTCCGTTGCTAAAAATCCTCAATCTTAGTCATTCAAAGTACTTGACAGAAACCCCTGATTTTTCAAAATTACCAAGTCTTGAAAAGCTCATTCTCAAGCATTGTGTAAGTTTGGGCAAGGTACACCAATCTATTGGATATTTACACAATCTTGTACTAATAAATTTGAAAGGCTGTACAAACCTAAGCAATCTCCCAAGTGAGGCATATAAGTTGAAATCTTTGAAAACTCTTATCCTATCTGGTTGTCTGAAGATTGACATCTTTAAAGAAGATATATTGCACATGAAATCCTTGAAAACTCTAATTTCTGAAAATACTGCTGTGGAACAAGTTCCCATTTCAGTTGTAAGCTCAAAAAGCATTGGATATATACATGTAGACGAAGAAAAGGGATTATCACTTACTGTTCTTCATTCTATAATTTTGTCTTGGATGTCCCATACTTTTAATCCCCTGTATCGTAATCGTCCGTTTCGTGGCATTTCATCATCTCTAGTATCCATGAATGTGGAGCATAATGCTTTGGTAGATCTAGCACCAATCCTTGGAAGCATTTTAAATCTGCGTACTGTTTTAGTACAACAATATGTCACGGAGTATCCAATACCTCATCAACTAATAGCATTTTTGGAAGAAGTTCAACAAGTTCGTCGTGTAACTTGGACTACATCTACACAACTTTCCAACAATCCATTCAGTCCATATTTGATTCAATTTGGAGGTTATCAAGAAGAAGTCTTCAATACTCTCCGAAAAAGCATTTATGATGAGGGATTGGCAGGCAGACAGTCTCGTAAAGTTTTTCTCCCTAGTGACAATTATCCTCATTGGTTGGCTTATATGAATGAGGGACACTCAGTCACTTTCACCTTGCCTGACAATTTTCACATGGATGGAATGATTTTGTGTGTTGAGCATTTATCACGCTTGGGAGACCCAACTCAATATCTTATTTGTGTCTTAGTGGCTAATTACTCAAAGTGCACAATCCAGTTATTCAATCGAGAGACAATAACTTCCTTGAATGATGTTGACTGGCAGGACGTGATATCACATATGGGATGTGGAGACCAGTTGGAGATTTTTATTATTTTTGAAAAAGGATTTGAAGTCCAGAAGACAGCGGTCTATCTAGTGTGTAATGGATCAATTACTCTCTATTCAAAACCTTAA 3102 0.3817 MDVASSLSIFSNFRVSGEVFIHCLGDDIHRNFVSHLSSSLLQAGVKHSLVSAEMLSEKFMPSITRFQIGIVVFTKAYIESYRCVEDLLRIIECHENHGLIVMPVFYDIDPSDLPDLKMESSYVRDPITGGFKKNPKVWSVKTTVKVTQMETERFNYPFILYTSAGSHAVNRVANLPTWDESKHRDDAELVEEIVKSVLAKLDRAFPVTKFSVELETHVKNVIGLFENQPIEVCRIGIWGMGGSGKTTLAKAIYNKIPFTFGDKSFIQDIRKVCQTDGRRGLVQLQKQLLSDVLKYVKIESGEMEKTTIDRLSGKKLFIVFDDVNGIDQLKHLCGNGIRLGAGSVIIITTRHLDLLYQQKVDYVYEMDELDEHDSVELFSWHAFREAEPREDFNKLARSVIAYCGGLPLALEVLGSYLSKRSENEWRSVLSKLEKIPNTQVQNILRISFDDLCNEMEKDIFLDVCCFFIGKDREYVTEILNGCGLHADIGIKILIERGLLKIEKNNKLGMHHLLRNMGREIVRQTSTMQPGKRSRLWVPKDVLDVLTKNTGTEAIVGLSLNGKLTNSDSFKADAFKEMKKLRFLQLDHVRLTGDYGYLSKQLRCISWHGFSLEHIPNNFYLEGAIAMDFQHSNLRLLWKEPTVFPLLKILNLSHSKYLTETPDFSKLPSLEKLILKHCVSLGKVHQSIGYLHNLVLINLKGCTNLSNLPSEAYKLKSLKTLILSGCLKIDIFKEDILHMKSLKTLISENTAVEQVPISVVSSKSIGYIHVDEEKGLSLTVLHSIILSWMSHTFNPLYRNRPFRGISSSLVSMNVEHNALVDLAPILGSILNLRTVLVQQYVTEYPIPHQLIAFLEEVQQVRRVTWTTSTQLSNNPFSPYLIQFGGYQEEVFNTLRKSIYDEGLAGRQSRKVFLPSDNYPHWLAYMNEGHSVTFTLPDNFHMDGMILCVEHLSRLGDPTQYLICVLVANYSKCTIQLFNRETITSLNDVDWQDVISHMGCGDQLEIFIIFEKGFEVQKTAVYLVCNGSITLYSKP 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01309 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 462 IPR027417 -
Vian9g01309 1033 Pfam TIR domain 19 131 IPR000157 GO:0007165
Vian9g01309 1033 Gene3D Ribonuclease Inhibitor 553 879 IPR032675 -
Vian9g01309 1033 Gene3D - 15 198 IPR035897 -
Vian9g01309 1033 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 127 IPR035897 -
Vian9g01309 1033 ProSiteProfiles TIR domain profile. 15 201 IPR000157 GO:0007165
Vian9g01309 1033 SUPERFAMILY L domain-like 568 846 - -
Vian9g01309 1033 Gene3D - 199 363 IPR027417 -
Vian9g01309 1033 Gene3D - 368 452 IPR042197 -
Vian9g01309 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 745 IPR044974 GO:0006952
Vian9g01309 1033 SUPERFAMILY "Winged helix" DNA-binding domain 439 545 IPR036390 -
Vian9g01309 1033 FunFam Disease resistance protein (TIR-NBS-LRR class) 370 452 - -
Vian9g01309 1033 PRINTS Disease resistance protein signature 403 417 - -
Vian9g01309 1033 PRINTS Disease resistance protein signature 234 249 - -
Vian9g01309 1033 PRINTS Disease resistance protein signature 712 728 - -
Vian9g01309 1033 PRINTS Disease resistance protein signature 310 324 - -
Vian9g01309 1033 Pfam NB-ARC domain 215 443 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01309 Vian-Chr9 28054344 28059048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01309 10 758 WRKY Transcription Factor Family AT4G12020 28.497 4.49e-72 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01309 - - vun:114167037 1376.69