Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01307 ATGGGATTGTTTGAAAATCAACCCACCAAAGTTTGTATGATAGGGATATGGGGAATGGGAGGATCGGGTAAAACTACCGTAGCCAAAGCCATCTACAATCAAATTCCGTGTGCATTTGATGATAAAAGTTTCATTCAAGGTATTAGAGAAGTATGTGAAACGGATGGCAGAGGCCTTGTTCATTTACAAGAAAAACTTTCCTCAGATGCCCTTAAAACAAATGTTAAAATAGAGAGTGGTGAGATAAAAAAAATTACGTTCGAGGACAGACTTTTTGGAAAAAAGTTGTTCATTGTGCTTGACGATGTGAAAGAGATAGATCAACTAAAAGACCTACTTGGAAATAATAAACGGCTTGGTCAACGGTTTGGTCAACGGTTTGGTCAAGGAAGTGTAATAATCATTACAACTAGAAATTTAGACCTGCTTTATCAACTTAATGTTGATTATGTTTACGAGATGGACACAATGGACGAAAATGTCTCCGTTGAGCTTTTTAATTGGCATGCTTTTGGAGAAGCAAAACTAAGAGAAGACTTCGTTAAACTTGCAAGATCTGCAGTTTCTTATTGTGGTGGACTACCACTCGCTCTTGAAGTCCTTGGTTCTTATTTAAGTAAGAGGTCAGTGAATGAATGGAGAAGTGTATTGTCAAAACTAGAACTAATTCCCAATACTCAAGTGCAGAACATACTAAGAATAAGCTTTGAGGGCTTATGTAGTGAAATGGAAAAGGATATATTTCTTGATGTATGTTGTTTTTTTATTGGTAAAGACAGAGACTATGTTACAGAGATACTAAATGGTTGTGGACTACATGCTGATATTGGAATAAAAGTTCTCATAGAACGTGGTCTTATAAAAATTGAAAAGAACAATGAACTTGGAATGCATCCTTTGCTCCGGGATATGGGACGAGAGATTGTGCGTCAAACTTCAACAATTCAACCTGGGAAGCGCAGAAGATTGTGGCTTCACAAGGATGTACATGATGTATTGACAAAGAATACTGGGACAGAAGCTATCGAGGGATTGTCTCTGAACAGTGATTTCGTCAAAGCTTGTGCTTTTGAGAAAATGAAGAGGTTGAGATTCTTGCAACTTGATCATGTACAAGTGAATGGAGATTACGGGTATCTTTCTAAGCAATTGAGATGGATCTACTGGCGAGGATTTCCTTTAAACTACATACCTAACAACTTTTATCTGAAAGAGGCAATTGTGATTGATTTCCAACACAGTAATCTTAGACTAATGTGGAATGAACCCCAGGTGCTGCGGTGGCTGAAAATCCTCAATCTCAGTCATTCCATGTTCTTAATTGAAACTCCCGACTTTTCAGAACTACGAAATCTTGAAAAGCTCATTGTCAAAAATTGTCCAAGATTGCGCAAGGTACACCAATCCATTGGGGATCTCCACAATCTTGTGCTAATAAATTTGAAAGGCTGTAGAAGGCTACGCAATCTTCCAACTGAGGCATATAAGTTGAAATCTTTGAAAACTCTCATCCTGTCTGGTTGTTTGAAGATTCACATATATGAAAAAGATATATTGTGTATGGGATCATTGACAACTCTAATTTCTGAAAATACTGCTGTGAAACAAGTTCCCTTTTCAATAGTAAACTCAAAAAGCGTTGGACATATACTTCTGGGAGGAAATAATGGATTATCATTTAAGGTTTTCCAATCTATCATTTCCTCTTGGATATCACCTAAAATTAATTTCCTGTCTGGTATTCGTCCGTTTCGGGGCATATCTTCATCTATAGTTTCCATGAGTACGGAGAATAATGATTTGGGTGATCTAGCACCAATCCTTAGCAGCGATTTAAATATTCTTAATGTTTTGGTGCAATGTGACGTGGAGTTTCAAAGATACCAACAAGTAATAGCAATTTTGGATGAGATACGAGGTCTAAACTTGACTGAATTTGAAATAAGACCATCACCAGAAACTTCAAAGCATCGTTTAACCCCTCATTTGATTGAATTCGGAAGTTTCCAAGAAGAAGTCTTCGATATTCTCAGCAAGAGCATATTTGAGGGATCAGAAAACAGTGCATCTTGCGATGTTTTTCTCCCTGGCGACAAAGTACCTTATTGGTTAGCTCATATGGGCGAGGGACATTCAGTAACTTTCACTATACCTGAGGGTCGTCGCATAAAGGGGATGACTTTGTGTGCTGTAAATTTATATAACCCCAGACACATGGCAACAACTGAATATCTTATTAGTATCTTAATGGTTAATTACACTAAGTGCACCATCCAGATATACAGGAGAATGACAGTACGATCCTTTAGTGATGTAGATTGGCAGGGCATAATATCAAATTTGGGACCTGGAGACAAGGTGGAGATTTTTGTTATTTTTGGAGATAAATTCCTAGTCAAGAAGACAGCTGTCTATCTAATGTGTGATGGATTAATTGGCAAGGAAGTGGATCCTTCTCTTGATCCAAAGAATATTGATTAA 2481 0.3744 MGLFENQPTKVCMIGIWGMGGSGKTTVAKAIYNQIPCAFDDKSFIQGIREVCETDGRGLVHLQEKLSSDALKTNVKIESGEIKKITFEDRLFGKKLFIVLDDVKEIDQLKDLLGNNKRLGQRFGQRFGQGSVIIITTRNLDLLYQLNVDYVYEMDTMDENVSVELFNWHAFGEAKLREDFVKLARSAVSYCGGLPLALEVLGSYLSKRSVNEWRSVLSKLELIPNTQVQNILRISFEGLCSEMEKDIFLDVCCFFIGKDRDYVTEILNGCGLHADIGIKVLIERGLIKIEKNNELGMHPLLRDMGREIVRQTSTIQPGKRRRLWLHKDVHDVLTKNTGTEAIEGLSLNSDFVKACAFEKMKRLRFLQLDHVQVNGDYGYLSKQLRWIYWRGFPLNYIPNNFYLKEAIVIDFQHSNLRLMWNEPQVLRWLKILNLSHSMFLIETPDFSELRNLEKLIVKNCPRLRKVHQSIGDLHNLVLINLKGCRRLRNLPTEAYKLKSLKTLILSGCLKIHIYEKDILCMGSLTTLISENTAVKQVPFSIVNSKSVGHILLGGNNGLSFKVFQSIISSWISPKINFLSGIRPFRGISSSIVSMSTENNDLGDLAPILSSDLNILNVLVQCDVEFQRYQQVIAILDEIRGLNLTEFEIRPSPETSKHRLTPHLIEFGSFQEEVFDILSKSIFEGSENSASCDVFLPGDKVPYWLAHMGEGHSVTFTIPEGRRIKGMTLCAVNLYNPRHMATTEYLISILMVNYTKCTIQIYRRMTVRSFSDVDWQGIISNLGPGDKVEIFVIFGDKFLVKKTAVYLMCDGLIGKEVDPSLDPKNID 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01307 826 SUPERFAMILY L domain-like 316 619 - -
Vian9g01307 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 250 IPR027417 -
Vian9g01307 826 Gene3D - 2 151 IPR027417 -
Vian9g01307 826 Pfam NB-ARC domain 3 222 IPR002182 GO:0043531
Vian9g01307 826 PRINTS Disease resistance protein signature 13 28 - -
Vian9g01307 826 PRINTS Disease resistance protein signature 90 104 - -
Vian9g01307 826 PRINTS Disease resistance protein signature 495 511 - -
Vian9g01307 826 PRINTS Disease resistance protein signature 191 205 - -
Vian9g01307 826 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 526 IPR044974 GO:0006952
Vian9g01307 826 Gene3D - 156 240 IPR042197 -
Vian9g01307 826 Gene3D Ribonuclease Inhibitor 330 665 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01307 Vian-Chr9 27988538 27991774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01307 3 491 WRKY Transcription Factor Family AT5G45050 30.058 1.56e-63 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01307 - - vun:114167169 1399.42