Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01304 ATGGAATTCGCGTCTTCATCAACCAAACTCCCACGGTATTACGACGTGCTCATCAACTTCAATGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTTTGCCCTCTCGTCCGTTGGACTCACCACTTTCCTTCACCATCAGAATGTAGTGGAGTCAATGCACGTCCAACAACCTATTCTCAATCTGTGTCGGGTAGTAATAATTGTTTTCACCAAAACCTATTCTGAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTCAATGGCACCAAACTTATTGCCGACATATTCTGCCTGTATATTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAGGGCGATTTTGGAAAGGCCTTGAAAGCAACTGCACATCAAACATTTTCAGCACAGCAACTTGAGCATGGCATGTCTAGATGGAGCCACGCACTCACCAAAGCCGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGCGATGCTGAACTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTATCAGTTTTGTCTGCTACTAAATTCCCAGTTGGATTACAAGACCAAGTGCAATATTTAATTCGAACTATAAAAGAAAAGTCCACGGATGTTTGTACAATAGGGATATTTGGAATGGAAGGATCAGGTAAAACCACCCTTGCCAAAGCCATCTACCATCAAATCCATGGTACATTCATGCATAAAAGTTTCATTGAAGATATTGCACAAGTTAGTGAACCAACTCATTTACAGGAACAACTTCTTTCCGATGTCCTAAAAACAAAGGTGAAGATAGATACCGTCGAGATGGGAAGAAATATGATTAAGGACAGACTTTTTGGGAAAAGAGTCCTCATTGTACTTGACGATATGGATGACTATCTTCCCTTATTAGATCTATGGGAGAGTCGTTCATGGTTAAGTAAAGGAAGTGTAATAATCATGACAAAAATAGACCAAATCCTATTTCTTAGATATCAAGTTCATTCTGTTTTTGAGATAAATCTAATGAATGAAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAAAAGGATACCATCACCTAGCCAGAAGTGTAATTTCTTGCTGTGGAGGAGTACCTCTAGCTCTTGAAGTCATTGGAAGTACTTTATTTGAAAGGACCAATGAGGAATGGCGTAGTGTATTGTTTAAATTAGAGAAAATTCCCATGTACAATGTTCGAATGATATTTAAAATAAGCTTCGACCATTTACGCAATCAAATGGAAAGGGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAGGACAGAGGCTACGCTACGAAGATCCTAAATGGCTCTGGAGTAGAAAATGATAGTGAAACAAGTGTTCTACATAGCTTTAGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATGGAGCGTAACCTCATTAAAGTCAAAAGAAATAACAAATTTGGAATGCATCCTTTACTACAAGAAATGGGAATAGCAATTTTTCGTGAAATTTCAGGAGAGAGACGTTGGAAGAACGGTCAACTGTTGTTTGATGGGGATGCAGAATATGCATTGAAAGTGAATGCTGTAAGAACATTCGTTATATGTGATTTGAAACTTCTTTTGAAAGTGTTTAACTTCTCATGTACGCAATTCATTTTTCTTTTTTGGTTCTTTAAATCACAGGAGAGAAAAGACTATGAGGTATTGCCTGTCTTGCTTTCAACAAGAAGAGAACCATCAAGACTTCCGAAAGGCGGTGTAAATTCTGAGAACCTTTATCCGAAATTGAGATGGATTAGTTTCCGTGGATTTTCTATAGAATACCTACCCAACTACTTTAATGCGGATGATACCATAGCGATTGATCTAAAACACAGTCTTCTTCAATTCTTTTTGGAAGAACCCCAGGTTTTGAAATCACTAAAAGTCCTTAACCTTAGTCACTCCATGTACTTAACAGAAACACCTGACTTTTCGAGACTACCAAATCTTGAAGAACTCATTCTAAAAGATTGTCCGAGATTGCGGGAAGTACACCAATCTATTGGACATCTCTGTTATCTTATACTACTCAATTTGAAGGACTGTAAACGTCTAAGCAATCTCCCCCAAGAGATATATAGGTTGAAATCTTTAAGAACTCTTATCCTCTCTGGGTGTTCGAAGATTGACCCAATGGAGAAAGATATAGTGCAAATGAAATCCTTGATAACTCTAGCTGCTGAAAATACAACTGTGAAAAAAGTGCCTTTTTCAATTGTAAGTTCAAAAGCCACTGGATATATATCCTTACAAGGATTTGAGAGATTGTCATGTAATCCTTTTCCTTCAATCATTATTCGGTCTTGGATGTCGCCAACAATGAATTCCATATCTTATATTAATTTGAATTGTGTGGATATGGAGGATAATAGTTGGGATGATATTGCGCCATTGCTTGGCAACTTGGCAAATCTTCGAACTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATCTAAGCAAGTAAAAAATATTCTGGTCGACTATTTTTCAAATATTACTGAATCAGAAATTTCAAAGCAGCATTTCAGATCTTCTTTGATCGGTGTTGGAGCATACCATGAATTCTTCAACGCTGTCAGCAATAACATATCTGAGGTATTGGCAAGTAGTGAGTCTTCTGATGTCTCTCTTCCAGGTGACAACCCCCCTTATTGGTTGGCCTATATGGGTCAGGGAGATTCTGTTTCTTTCACTGTGCCTCCAGATAATTCCATGAAGGGAATGTTTTTGTGTGTTTTTAATGTATCAACTCCTGAAATTGTGGCATCTGAAGGTTTTAGAAGTGTGTTAATTGTTAATTACACAAAGTGCACATTGCAGATACACATGCATGGCAAAATAATTTCCTTTAATGATATAGATTGGAAGGCTATAAGGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTCACTTTTTCTCAAGGAGTGGTGGTCAAGAATACACATGTCTATCTTATATTTGGTGAATCACATTACTTGGAAAAAGTGCCTACTCCAAAAAAAAATGATCTCCTTAGATTCATAAAGAAAATTGTAAAGTGA 3114 0.3757 MEFASSSTKLPRYYDVLINFNGEDIRRKFVSHLDFALSSVGLTTFLHHQNVVESMHVQQPILNLCRVVIIVFTKTYSESAWCLHQLQQIIQWHQTYCRHILPVYYEIQPSDVRLQKGDFGKALKATAHQTFSAQQLEHGMSRWSHALTKAANFFGWDESNHRSDAELVDKIVKSVLNLSVLSATKFPVGLQDQVQYLIRTIKEKSTDVCTIGIFGMEGSGKTTLAKAIYHQIHGTFMHKSFIEDIAQVSEPTHLQEQLLSDVLKTKVKIDTVEMGRNMIKDRLFGKRVLIVLDDMDDYLPLLDLWESRSWLSKGSVIIMTKIDQILFLRYQVHSVFEINLMNENESLELLSWHAFREAKPKKGYHHLARSVISCCGGVPLALEVIGSTLFERTNEEWRSVLFKLEKIPMYNVRMIFKISFDHLRNQMERDLFLDVCCFFVGKDRGYATKILNGSGVENDSETSVLHSFRVDADSGIRVLMERNLIKVKRNNKFGMHPLLQEMGIAIFREISGERRWKNGQLLFDGDAEYALKVNAVRTFVICDLKLLLKVFNFSCTQFIFLFWFFKSQERKDYEVLPVLLSTRREPSRLPKGGVNSENLYPKLRWISFRGFSIEYLPNYFNADDTIAIDLKHSLLQFFLEEPQVLKSLKVLNLSHSMYLTETPDFSRLPNLEELILKDCPRLREVHQSIGHLCYLILLNLKDCKRLSNLPQEIYRLKSLRTLILSGCSKIDPMEKDIVQMKSLITLAAENTTVKKVPFSIVSSKATGYISLQGFERLSCNPFPSIIIRSWMSPTMNSISYINLNCVDMEDNSWDDIAPLLGNLANLRTVLVQCDTEFQLSKQVKNILVDYFSNITESEISKQHFRSSLIGVGAYHEFFNAVSNNISEVLASSESSDVSLPGDNPPYWLAYMGQGDSVSFTVPPDNSMKGMFLCVFNVSTPEIVASEGFRSVLIVNYTKCTLQIHMHGKIISFNDIDWKAIRSNLGSGDKVEIFVTFSQGVVVKNTHVYLIFGESHYLEKVPTPKKNDLLRFIKKIVK 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01304 1037 Gene3D - 340 424 IPR042197 -
Vian9g01304 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 752 IPR044974 GO:0006952
Vian9g01304 1037 Pfam NB-ARC domain 192 428 IPR002182 GO:0043531
Vian9g01304 1037 Pfam TIR domain 14 176 IPR000157 GO:0007165
Vian9g01304 1037 PRINTS Disease resistance protein signature 375 389 - -
Vian9g01304 1037 PRINTS Disease resistance protein signature 210 225 - -
Vian9g01304 1037 PRINTS Disease resistance protein signature 714 730 - -
Vian9g01304 1037 PRINTS Disease resistance protein signature 282 296 - -
Vian9g01304 1037 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Vian9g01304 1037 Gene3D Ribonuclease Inhibitor 580 895 IPR032675 -
Vian9g01304 1037 SMART till_3 13 153 IPR000157 GO:0007165
Vian9g01304 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 434 IPR027417 -
Vian9g01304 1037 SUPERFAMILY L domain-like 598 831 - -
Vian9g01304 1037 Gene3D - 175 330 IPR027417 -
Vian9g01304 1037 Gene3D - 8 174 IPR035897 -
Vian9g01304 1037 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01304 Vian-Chr9 27958547 27962356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01304 11 760 WRKY Transcription Factor Family AT4G12020 26.459 4.44e-54 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01304 - - vun:114165880 1528.84