Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01286 ATGATAGAGATACATGGACCGGAAGGATCCGGTAAAAGTACTCTTGCCAAAGCCATCTACAATCAAATTCATTGGACATTCAAGCATAAAAGTTTCATTGAAAATATTTCACAGGTTAGCGGAATAAGAGGGCAACTTCGTTTACAAGAACAACTTCTTTTAGATGTCCTAAAACAAAAGATGGAGATTCCTAGCGTTGATGTGGGAAGAACTATGATTAGGGAAAGACTTTTAGGAAAAAAGGTTCTGATTGTACTTGACGATGTAAATTACTTTAATAATTTATTCGACCTATGGGATTGTCTTAAATTGTTAGTTGAAGGAACTGTTATAATCGTTACATCAATATATAGAATAGGGAGAGATCAAGTTCATTCTGACTTTCGGGTAGAGCCAATGAACGAAGAGGAGTCCCTTGAGCTTTTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACGAAGACCTTGCCAGAAAAGTAGTTAGTTATTGTAAAGGACTACCACTAGTTCTTGAAGTCGTTGGAAGTAGTTTATTTAAAAGGACGAAAGAAGAATGGAACAGTGTATTGTTTAAATTTGAGAAGGTTGACATGCAGATGGTTAACAAGCGTATTTTTCGAGAGATAATAAAAGTAAGCATCGAAGGTTCACTCAATGAAATGGAAAAAGATATATTCCTTGATATATGTTGTTTCTTTATTGGTAAGAGCAGAGCCTATGTAAGGAAGATCCTAAATGGCTGTGGAGTAGACGCTGATATTGCAATAAGAGTTCTCATCGAGCGTAACCTCGTCAAAACTAACAAGAATAACAAATTAGGAATGCATCCTTCGCTACAACAAATCGGAATACAAATTATTCATGAAAATTCAGGAAAGGATTTTGGGAAGAACAGGCGACTGTGGTTTTATAAGGATACAAAATATGGGACAGAAGCCATGCAGTGGTTGCCTTTCAATGCCTTCGAAACTTTACAACCGACTGTAAATTCTAAGTACCTTCTTAAGAAACTAAGATGGATCAGTTGGCATGGGCTTTCTTCAGAAGGTCTACCTAACAACTTGTATGAGCATGATGCAATAGCTATTGATTTAAAACGCAGTCTTCTTCGATTTCTCTGGAAAACACCCCAGGTTTTGAGATCGCTAAAAGTCCTTAACCTCAGTCACTCCAAGCATTTAACTACAACCCCTGACTTTACCGGATTACCAAGTCTTGAACACCTCATTTTCAAATATTGTTCGAGATTGAGCAAATTACACCAATCTATTGGATCACTCAATAGTCTTATTCTCCTAAATTTGAAATATTGTACAAGTCTATACAATCTTCCAACAGAGATATATGACTTGAAATCTTTAAGAACCTTCATTCTCTCTGGTTGTTCCAAGATTGACATAATGGATAAAGATATAGCAAAGTTGGAATCCTTGATAACTCTAATCGCTGAAAATACAACTGTGAAAGAAGTTCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATCCCTACGTCGATTTGAGGGATTATCTCATAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCCCCAATAATGAATCCCATCTCTTATATTCATTCGTTTTGCATGGATACGGAGGATAATACGATTGATATTGCACCATTGCTTAGCACCCTTGCAAATATTCGAAGTTTTTTGGTAGCATGTGACACCGAATTTGAATTATCTAAGCAACTGAAAAATATTTTGGTTGAATATTTTGCGAATATTACAGAATCAGGAATTTCAAAGCAGCACTTCAGGTGTTCTTTGATTGGTGTTGGAGCATACCATCAATTCTTCAATGCTGTCAGCGATAACATATCTCAGGTTCTTCTCCAGCTTTGTCTTTGTTTCTTACCTTCACTATATCATTTTAGTTATTAA 1926 0.3583 MIEIHGPEGSGKSTLAKAIYNQIHWTFKHKSFIENISQVSGIRGQLRLQEQLLLDVLKQKMEIPSVDVGRTMIRERLLGKKVLIVLDDVNYFNNLFDLWDCLKLLVEGTVIIVTSIYRIGRDQVHSDFRVEPMNEEESLELFSWHAFREAKPKEEYEDLARKVVSYCKGLPLVLEVVGSSLFKRTKEEWNSVLFKFEKVDMQMVNKRIFREIIKVSIEGSLNEMEKDIFLDICCFFIGKSRAYVRKILNGCGVDADIAIRVLIERNLVKTNKNNKLGMHPSLQQIGIQIIHENSGKDFGKNRRLWFYKDTKYGTEAMQWLPFNAFETLQPTVNSKYLLKKLRWISWHGLSSEGLPNNLYEHDAIAIDLKRSLLRFLWKTPQVLRSLKVLNLSHSKHLTTTPDFTGLPSLEHLIFKYCSRLSKLHQSIGSLNSLILLNLKYCTSLYNLPTEIYDLKSLRTFILSGCSKIDIMDKDIAKLESLITLIAENTTVKEVPFSIVSSKSIGYISLRRFEGLSHNLFPSIIRSWMSPIMNPISYIHSFCMDTEDNTIDIAPLLSTLANIRSFLVACDTEFELSKQLKNILVEYFANITESGISKQHFRCSLIGVGAYHQFFNAVSDNISQVLLQLCLCFLPSLYHFSY 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01286 641 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 485 IPR044974 GO:0006952
Vian9g01286 641 PRINTS Disease resistance protein signature 381 397 - -
Vian9g01286 641 PRINTS Disease resistance protein signature 76 90 - -
Vian9g01286 641 PRINTS Disease resistance protein signature 1 16 - -
Vian9g01286 641 PRINTS Disease resistance protein signature 167 181 - -
Vian9g01286 641 Pfam NB-ARC domain 2 212 IPR002182 GO:0043531
Vian9g01286 641 Gene3D - 133 213 IPR042197 -
Vian9g01286 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 232 IPR027417 -
Vian9g01286 641 SUPERFAMILY "Winged helix" DNA-binding domain 211 310 IPR036390 -
Vian9g01286 641 Gene3D - 1 121 IPR027417 -
Vian9g01286 641 Gene3D Ribonuclease Inhibitor 255 599 IPR032675 -
Vian9g01286 641 SUPERFAMILY L domain-like 324 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01286 Vian-Chr9 27522185 27524329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01286 2 498 WRKY Transcription Factor Family AT4G12020 27.848 2.61e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01286 - - vum:124837950 876.315