Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01284 ATGTACTACCTTGACCCCGAATCGGTCTCTGCCAGATCCTCTCGCACCTCCGCCAATTCCAACTGCTCCGATTGCGACGACGACTTCGTGACCGAAGATGACGATATTCGTGCCGCTGGTGACTCCATCACCGAAGTCGAACAGGTTTCCTCAAGCGCCATGGCGGATATGAAATTAATTGTCGACTGCATGGTCTCTTCCGGCTACGCAAAGGAGTGCGTTAGCATTTACATTGTGATCCGAAAATCCATAATCGATGAAGGATTTTATCGCCTCGGCGTTGAGAAACTGAGCTCGTTGCACGCAAACATGATGGATTGGGAAGTGCTTGATTTAAAAATCAAGAGTTGGTTGGAGGCGGTGAGGATTGCCGTTAGAATTCTGTTTAGCGGAGAGAGAATCCTCTACGACAACGTCTTTAGTTACTCAGATTCCGTAAGAGAATCCTGCTGCGTCGAGATTTCCAAAGACGACGCCTCTCTTCTTTATGAATTGCCCGAACTCTTTGCCAAAACAAAGAAATCGTCGCTAGAGAAGCTGTTCCGCGTGCTCGATATGCACGCTGTGGCTTCAAAACTGTTGTCGGAGATCGAGTCCATATTTTCCTCCGATTACAATTCCGCCGTGCGTTCTCAGATGGTGAGCATTGTATCTGATTTGGCAAAGTCAACTCTGGAGAAATTGATTAATGAAACAATAGAACAATCACGTTATATTTGTTGCTTCACATGCATTACTGATGACTTTGAAAAGGAAAGGGAAAATTTGATAGCAAAAAAGGAAACATGGGAAGAGTATGCTAGAGTGGCAACTAGAAGAGGTGATAACATACGAAAAGATGTCACACATTGGCAAAAGCAAGCTATAGAACTTATTGAAGAAGACACCAAAAAGAAAGTGACATGTTTCTTTGGATGGTGTCCTAACTGCAAATGGCAATATAGTAGGGGGAAGGAATTGGAAACTAACAAGGAGATTGTGGCAGTGAATACATCTAACAAGAATGCAATGACAATGGTTGAAAAGGGGAAGAATATTAAATATTTGTTGTGCGAAGTGTTGTTGGAGAACTTATCGATAACCAGATGTCGACAACTGAAAAGTATAGTGAAAGATGAAAGCAAAAGGAAAGATTCAAGAGAAGACATAATTGATGCTCATAATGATAACAAGAGTATTGTTTCAGTATTTCCAAATTTAACCACTCTTCATGTCGCCCATTGTCCCCTGTTACATTCTATACTTCCTGTGGTTGTTCCTCGAAATGTTCCAAAACTTAAATCTATTTATGTAGTGTATTGTGAAGGACTAAAATACATATTTTGCCCATTCCAAGATAAGCATGAAGAGGAAGAATCACATCAAGAATTAAAGGATCTCCTATTCACTACTTTGAAACGACTTGTTCTTGAATACTTGCCTAATTTTTTAGACATTTTCATGTGTCCATCGGTAAAGAAGTCATCTTCCAAAGATGAGTCGAAAGAACAAAAAGAATCAAACCCCATGAAATGTGAGATTTTACATTGGATCCACAAATATAGAAACAAACGGAAAACTACCAAAATTTCTTTGGATTCCACAGATCAATTGCAAGACTCTTCTAACTCAATGAGGGTGTTAACCTTTCCTGTAGGATATTTTAAAGAAGATCGGGATATATCAAAAAGATTAATTGATATTCTTTGTGGTCTTTATCTTGGTGGAGAGATTGGCAGTCGAGAGTCAGTAGGCTATGAAGTTGCAACTCAAGTTGAAGTAACATCGATAAGCAGTAAATGGAGTCATGCTAAGATTAGAGACAGCCCAATACTTAAACAGATTGACGAAGACAACCAACGTCAAAATGACGTTGGATCAAATGAGTTGGAGGAAGTAGAGAACCAAAGCAAAGAAACAACAGAAGATGAAGACAAAACACATTCACCAGAAAATGAAGAAGAACAAATGGCGATATCATCTTCAGATCTTAACATGGAGCTTCCTACAACCAAAGATGTTAATGATGGAGACTTTGAGAGAACATCTAACTCAGTGGTTTCTCAAAATACTAACTCAGTGGTTTCTCAAAATACTAATACTACAGGGTCAGAACTGACATATCACCATGTAAAGAAGATATTACTGGAGATGCCGGATAATCTTGACGATGATTCTAAAACTGAAGTAGCATCAGGGATTGTGAATATAGAACTTGAAGATGTTGGTGTTGAAGACATTCAAAAAGCTTCTCCAGGTTATTAG 2244 0.3935 MYYLDPESVSARSSRTSANSNCSDCDDDFVTEDDDIRAAGDSITEVEQVSSSAMADMKLIVDCMVSSGYAKECVSIYIVIRKSIIDEGFYRLGVEKLSSLHANMMDWEVLDLKIKSWLEAVRIAVRILFSGERILYDNVFSYSDSVRESCCVEISKDDASLLYELPELFAKTKKSSLEKLFRVLDMHAVASKLLSEIESIFSSDYNSAVRSQMVSIVSDLAKSTLEKLINETIEQSRYICCFTCITDDFEKERENLIAKKETWEEYARVATRRGDNIRKDVTHWQKQAIELIEEDTKKKVTCFFGWCPNCKWQYSRGKELETNKEIVAVNTSNKNAMTMVEKGKNIKYLLCEVLLENLSITRCRQLKSIVKDESKRKDSREDIIDAHNDNKSIVSVFPNLTTLHVAHCPLLHSILPVVVPRNVPKLKSIYVVYCEGLKYIFCPFQDKHEEEESHQELKDLLFTTLKRLVLEYLPNFLDIFMCPSVKKSSSKDESKEQKESNPMKCEILHWIHKYRNKRKTTKISLDSTDQLQDSSNSMRVLTFPVGYFKEDRDISKRLIDILCGLYLGGEIGSRESVGYEVATQVEVTSISSKWSHAKIRDSPILKQIDEDNQRQNDVGSNELEEVENQSKETTEDEDKTHSPENEEEQMAISSSDLNMELPTTKDVNDGDFERTSNSVVSQNTNSVVSQNTNTTGSELTYHHVKKILLEMPDNLDDDSKTEVASGIVNIELEDVGVEDIQKASPGY 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01284 747 Coils Coil 616 636 - -
Vian9g01284 747 Pfam Exo70 exocyst complex subunit 115 235 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian9g01284 747 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 224 IPR004140 GO:0000145|GO:0006887
Vian9g01284 747 MobiDBLite consensus disorder prediction 605 661 - -
Vian9g01284 747 SUPERFAMILY RNI-like 355 439 - -
Vian9g01284 747 MobiDBLite consensus disorder prediction 1 22 - -
Vian9g01284 747 SUPERFAMILY Cullin repeat-like 41 235 IPR016159 -
Vian9g01284 747 Gene3D Exocyst complex component Exo70 7 237 - -
Vian9g01284 747 MobiDBLite consensus disorder prediction 647 661 - -
Vian9g01284 747 MobiDBLite consensus disorder prediction 605 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01284 Vian-Chr9 27378709 27391064 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01284 3 229 EXO70 exocyst subunit family AT3G09520 51.304 4.09e-57 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01284 K07195 - var:108346729 382.489