Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01273 ATGTGCAGATATAGTGACTATACAATTCCCATGGATTCTGCTTCCTACTTTCCAACTTTCGCAGGAATCTTAGCTTTGCTAATTGCATACAAAGTGGTTAGGTTCATCAGATCTCCTAAACAAAGAAAAGGAACCAAAGTACCCGAACCTCACGGTGCTTTACCTTTGATAGGGCACCTCTACCTTCTCAATGGTAGAATACCCTATTTCAGGACATTCTCAGCCATGGCTGAGAAATATGGTCCAGTTTTCTGTGTCAAACTGGGTTGCCACCCCACCATAGTGGTGAACAACAGGGAAATTGCCAAAGAGTGCCTCACAACAAATGACAGAATTTTTGCCTCAAGGCCAAACACTTCTGCGGGCAGACTCATGGGTTACAACAATGCAGTCTTTGCCCTTGCCCCTTATGGAAATTACTGGCGTGAGATCAGAAAAATGGCTGTTCTCGAGATTTTGTCAAGCCACAGGCTTGAGAAGCTGAAGCATGTGAGAGACAGTGAAACACTGTCTCTTGTGAAGAACTTGTACTCATCAATGACAGTGTCCTCTGCAAAGAACGTGAAGGGCTCAACTGAAGTGGCTATAAGCAATCTGTTAGAGCACATGACCTTCAACATAATTGTGAGGATGATTGCTGGGAAGAGATTTGGAGGGGACACTTCCAACGATGAAGATAATGAAGCATGGAAGCTGAGAAAGGCCATAAAAGATGCCACATATCTGTCTGGTGTTTTTGTGGTGGCTGATGCAATTCCATCGCTCAGTTGGTTTGATTTCCAAGGACATTTAAGTTTCATGAAAAGAACAGCTATGAAACTAGACAGTATTCTTGAGAGATGGCTGCAAGAACACGTGAAAACGAGAGGAGAGATGAAGAATGGTGGATGTGAAAGGGACTTCATGGATGTGATGTTATCATCTTTTGAAGAAGAAAATATTTGTGGCTATAAGCGGGACATCGTTATCAAAGCAACATCATTGATCCTTGTCCTTACTGGCTCTGGAAGCACGGCCATAACCCTAACATGGGCACTCTCCTTACTCCTCAACCACCCCAAGGTTCTAAAGGCAGCCCTACAAGAGTTGGACACCCACGTAGGAAAAGAAAGATGGGTCGAAGAATCTGACATCAAAAACCTCAATTATCTCCATGCCATTATCAAAGAGACCCTTCGTCTGTACCCGCCAGCACCCTTAACAGGAATCAGGGAGGCGACGGAAGATTGCTCTTTGGTAGGGTACCATGTCCCAAAGGGAACACGATTGCTTATTAATCTGTGGAACTTGCAAAGGGATCCAGAAGTATGGCCTAACCCTGATGAGTTTCAGCCAGAGAGGTTCCTCACCACTCACAGAGACATTGATTTTATGAGTCAGGACTTTGAGTTGATTCCATTTAGCATTGGAAGAAGGTCGTGCCCTGGCATGACCTTTGGGCTGCAGGTGACGCACTTGACCTTGGCTCGCTTGCTTCAAGGGTTTCATATTTTCACAAAGGATGGTGCTGACGTTGATATGACTGAAGGGTTAGGAGTGGCTTTGCCTAAGGAACAAGAACTTCGACTTATTCTCCAACCTCGTCTTCCATTGGGGCTTTATGAAAGCCTTTGA 1614 0.448 MCRYSDYTIPMDSASYFPTFAGILALLIAYKVVRFIRSPKQRKGTKVPEPHGALPLIGHLYLLNGRIPYFRTFSAMAEKYGPVFCVKLGCHPTIVVNNREIAKECLTTNDRIFASRPNTSAGRLMGYNNAVFALAPYGNYWREIRKMAVLEILSSHRLEKLKHVRDSETLSLVKNLYSSMTVSSAKNVKGSTEVAISNLLEHMTFNIIVRMIAGKRFGGDTSNDEDNEAWKLRKAIKDATYLSGVFVVADAIPSLSWFDFQGHLSFMKRTAMKLDSILERWLQEHVKTRGEMKNGGCERDFMDVMLSSFEEENICGYKRDIVIKATSLILVLTGSGSTAITLTWALSLLLNHPKVLKAALQELDTHVGKERWVEESDIKNLNYLHAIIKETLRLYPPAPLTGIREATEDCSLVGYHVPKGTRLLINLWNLQRDPEVWPNPDEFQPERFLTTHRDIDFMSQDFELIPFSIGRRSCPGMTFGLQVTHLTLARLLQGFHIFTKDGADVDMTEGLGVALPKEQELRLILQPRLPLGLYESL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01273 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 CDD CYP82 81 528 - -
Vian9g01273 537 FunFam Cytochrome P450 82C4 37 526 - -
Vian9g01273 537 Pfam Cytochrome P450 48 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 Gene3D Cytochrome P450 37 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PANTHER CYTOCHROME P450 82C3-RELATED 24 534 - -
Vian9g01273 537 SUPERFAMILY Cytochrome P450 48 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01273 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01273 Vian-Chr9 26966124 26968768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01273 48 534 Cytochrome P450 AT4G31970 48.992 4.52e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01273 K17961 - gmx:100806378 850.121