Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian9g01272 | ATGACTTTGCAAAGCAGTAGAGGCTACCACGAGTGCACGACCCGCCATAGCTTGGCAATCATTCTAAGTCCGGACAAGTCAAGTTTAAGTGCAACAAGTCGTCTCACCCTTGCTTTTGTGTTTGTGTTTTGCTTGGGTATGCTTTTCTTTTGCAATGATCATCTACTTGGATGTGAGCAGAGACGTATGAGGTGCCCGCGATGCGATTCATCCAACACCAAGTTCTGCTACTGCAACAACTACAACCTCACTCAGCCCCTCCACTTTTGCAAGACGTGCCGCCGCTACTGGACCAAAGGTGGCGCTCTTTGCAACGTTCCCATCGGCGGCGGCTGCCGGAAAAACAAAAATATCGGCGTGGCGAACTCAGCCGTTGCATCTGAGAGCGGATCTGGAGCGGATCTGGAGCGGATCTGTAGTGGATCTGGAGCAGATCTGGACGAAGCTGGCGGTGAGGGTTGGACGAAGCTGGCGGTGGATCTGGACGAAGCAGATCTGGAGCGAATCTGTAGTGGATCGACGACGAGGCAGTGGTTGACCACGCGACGTCGAGGCATCAACGGGGAGGCCGCGGCGGTGAGGGAGCAGTAG | 591 | 0.5465 | MTLQSSRGYHECTTRHSLAIILSPDKSSLSATSRLTLAFVFVFCLGMLFFCNDHLLGCEQRRMRCPRCDSSNTKFCYCNNYNLTQPLHFCKTCRRYWTKGGALCNVPIGGGCRKNKNIGVANSAVASESGSGADLERICSGSGADLDEAGGEGWTKLAVDLDEADLERICSGSTTRQWLTTRRRGINGEAAAVREQ | 196 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian9g01272 | 196 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 60 | 129 | IPR045174 | GO:0003700|GO:0006355 | |
Vian9g01272 | 196 | ProSiteProfiles | Zinc finger Dof-type profile. | 63 | 117 | IPR003851 | GO:0003677|GO:0006355 | |
Vian9g01272 | 196 | Pfam | Dof domain, zinc finger | 62 | 117 | IPR003851 | GO:0003677|GO:0006355 | |
Vian9g01272 | 196 | ProSitePatterns | Zinc finger Dof-type signature. | 65 | 101 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian9g01272 | Vian-Chr9 | 26961663 | 26963257 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian9g01272 | 59 | 147 | C2C2-Dof Transcription Factor Family | AT1G51700 | 53.465 | 6.28e-31 | 110 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Vian9g01272 | zf-Dof | 3.5e-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian9g01272 | - | - | var:108339373 | 161.77 |