Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01254 ATGGGTGAGGAATATGGCATTATATCGAAGGAGACAGTAAAGCCATCTTCCCCAACCCCTATTCAGCACTTCAAACTCTCTTTTCTCGACCAATTGGCTCCTTCATTCCATGTTCCCATTCTGCTCTTTTACTCTGCCTCTGATGTTAGAACCTTTGCTGCCACTGACCACAGTGCACTGTCACAAAAGTTGAAAACTTCTCTGTCACAAGTCCTCACTCTCTATTACCCATTTTGCGGAAGACTCAGAAACTCTTCAATCATTGAGTGCAACGACGAGGGTGTTCTTTTCATCCACTCTAAACTCCCCATTGAGCTCTCAAACATTCTCCAAAACCCTCAACTTCACACCCTCTATGAACTTCTCCCATGTCCTCCTTACAACCTTGAACCACAACAAAGGGATACGTTCGGGATCATGGCAGTTCAGTTGAGCCAATTCAAGTGTGGGGGCATAGCCCTTGGCGTGTGCTTCTCACACAAGATCGCTGATGCTTCCACTGCAGCATCGTTTCTCAACGCTTGGGCTGCAACATCACGTGGACACGGCAATAGCAACCTCGTTCCACCTCCAATGGAAGAGGCAAGTCTGCTTTTCCCATCGAGGAACATATCCGTTGACATGACAAGTGGCATGGTTGGCCAAGAAAAGACTGTGACAAAGAGATTCATATTTAGTGGCAGCAGTATTTCTAGATTGAGACAAACCATAGGGTGCCCCAGTTTCAATCCCTCACGCGTTGAAGCCGTGACGACGCTGCTATGGAAATCATCACTGGAAGCAGCGAAAGAAAGTTTAGATTCTGGGGAAGAAATAATTGTTGCTTCTGCGGTATCCCACACTGTGAACATTCGCAGCAGAATGGTTCCATCTTTGTCGAAGCATTCAGTTGGAAACATTTGGCAATACGCGGTGTCTTCGTTGGTGGAAGTGGAGGGGGAAGTGGGGTTGCGTGATTTGGCAGAGAGAACGAGGGAAACGATAGGAAAAGTTGATGGAGATTATATAAAGAAACTTCAGAGTGATGAGTTTGTTGAAGTAGTTCAGGCTATAGAAGAAGCAAGGAGACTGGCTGAAGAAAAGGGTGTTCGAGGTTATGGGTTTACCAGTTGGGTAGGGTTTGAGTTCTATGAAGTTGATTTTGGATGGGGAAAGCCCAGTTATGCTAGCACCATTCCTGTGCCCATAAAAAATTTGGGAACTTTGATGAGCACAAAGGATGGAGATGGCATAGAGGCATGGCTTACCTTGACCACACGTGACATGGCTCGGCTTGAACACAATGCAGAACTTCTGAACTTTGCGTCGTTTGATTCTTAA 1320 0.4606 MGEEYGIISKETVKPSSPTPIQHFKLSFLDQLAPSFHVPILLFYSASDVRTFAATDHSALSQKLKTSLSQVLTLYYPFCGRLRNSSIIECNDEGVLFIHSKLPIELSNILQNPQLHTLYELLPCPPYNLEPQQRDTFGIMAVQLSQFKCGGIALGVCFSHKIADASTAASFLNAWAATSRGHGNSNLVPPPMEEASLLFPSRNISVDMTSGMVGQEKTVTKRFIFSGSSISRLRQTIGCPSFNPSRVEAVTTLLWKSSLEAAKESLDSGEEIIVASAVSHTVNIRSRMVPSLSKHSVGNIWQYAVSSLVEVEGEVGLRDLAERTRETIGKVDGDYIKKLQSDEFVEVVQAIEEARRLAEEKGVRGYGFTSWVGFEFYEVDFGWGKPSYASTIPVPIKNLGTLMSTKDGDGIEAWLTLTTRDMARLEHNAELLNFASFDS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01254 439 Gene3D - 5 207 IPR023213 -
Vian9g01254 439 Pfam Transferase family 7 431 - -
Vian9g01254 439 PANTHER F21J9.9 7 436 - -
Vian9g01254 439 Gene3D - 215 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01254 Vian-Chr9 26564896 26566215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01254 13 410 Monolignol Biosynthesis Gene Families AT5G48930 24.122 6.98e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01254 - K13065 gmx:100792323 541.576