LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian9g01241	ATGAAAATGGGATCTCATCAAAGTTTTGGAAGGCGCAAATCAGAAAGATCCAAACGATGGGGTTGTGGTGGAAGAGGTGGACGCAGTGATTTTGGATATGGTGGAAGGAATAATGACTTAGGATATGGTGAAAGGGGTAGTGATTCAAATTATGGAGCTAGGGGAACTGCTTCTTTTGGGAGAGGAGGTCGTGGTTTTGACTATGATGCTGAGAGGATTCTTAATGCTGATGAAATGATCGTGAAGAGCCTCAAAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTCTCCACCTTCGATAACCGACTATCCGACATCTCTGACCTAATAAACGGTGACGATTCTAAATCCTCTAAAGAGGAAGAACTCGACCGCTTTGAAGTTGTGGAGAAAATGATTTTTGCCAACGCATCTATGGAGCAGTTTTCGATTGCACCACCCTCCTCTACTGTGGGACGCATAGGGCCCGCCATCGTGGACCCGGCAGAGAACGCGATTCAACTTGTAATGTCACGACTAGAGGACGAGATGTGGCATGTGCTGATTTGCAACACGATCCCGCTCGACGCCGTGAACCGCTACAGTTCGATCAGGAGGGTTTCACTCTCGTTCGGCTTGCACGACGGCGCCATTGACGATATTGTTGAGTTTTGTTTGCTTGCGTAA	672	0.4777	MKMGSHQSFGRRKSERSKRWGCGGRGGRSDFGYGGRNNDLGYGERGSDSNYGARGTASFGRGGRGFDYDAERILNADEMIVKSLKAAKEDREDMLLIFSTFDNRLSDISDLINGDDSKSSKEEELDRFEVVEKMIFANASMEQFSIAPPSSTVGRIGPAIVDPAENAIQLVMSRLEDEMWHVLICNTIPLDAVNRYSSIRRVSLSFGLHDGAIDDIVEFCLLA	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian9g01241	223	MobiDBLite	consensus disorder prediction	1	23	-	-
	Vian9g01241	223	MobiDBLite	consensus disorder prediction	8	23	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian9g01241	Vian-Chr9	26252739	26253898	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian9g01241	71	223	EXO70 exocyst subunit family	AT5G50380	35.417	2.00e-21	90.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian9g01241	K07195		-	gmx:100809716	198.749