Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01238 ATGGCCACCCCAAACGACGCCGCTTCGCCGACCAAGAAGCCTCAACCCATCCCCTGGACCCACCAAGAAACTGTCCACCTCATCGGCGCCTACCAGGAGAAGTGGTACGCGCTCAAGCGCGGCCCACTCCGCCACAACCAGTGGGAGGAGGTCGCCGTCATCGTCGCCGCCCGCTGCGGCTACGACCTCGCGTACCCCGCCAAGTCCGCCCTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGCGCCGAAAAGAAACACGTCGCCGCCACGCTCCGTCCCGCCGCCTGGCAGTACAACGCTCTCATGGAGGACCTCGAATGCGGTCCCCTCCCCATCTCCGCCCTCGCCCCGTTCCAAAACGACACCGATTCAGATCCCGACGACGACGGCACTTATCGGAACGGCAATAATGGCGATGAGAGCTTTGTGAAGTCGAAGAGTATTAACTGTATTCTCGGCGAGAGGCCCGTGAGAATGAAAAGCGGTGAAAGAGGGTTTTTGAGGGAGCGTGCTGAAGAAGAACGAGACGAAGACGACGATGACGATCGCGACGACGATGTTTTGGCGTTGCCGGCGGAGATTAGGGCTTTCGCTGAGAGGTTTATTGGAATGGAGAGTTTGAAGATGGAAATGATGAAGGAAACTGAAAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTGTGGATTCGCAGCGGAGGATCGTTGATTCCATTGGGAGGGCGTTTGGGTCTAACAAGAGGGTCAAGATTACTCAACAAATCTGA 786 0.5763 MATPNDAASPTKKPQPIPWTHQETVHLIGAYQEKWYALKRGPLRHNQWEEVAVIVAARCGYDLAYPAKSALQCRHKMEKLRQRHRAEKKHVAATLRPAAWQYNALMEDLECGPLPISALAPFQNDTDSDPDDDGTYRNGNNGDESFVKSKSINCILGERPVRMKSGERGFLRERAEEERDEDDDDDRDDDVLALPAEIRAFAERFIGMESLKMEMMKETERCRLEMEKKRIQMIVDSQRRIVDSIGRAFGSNKRVKITQQI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01238 261 Gene3D - 19 86 - -
Vian9g01238 261 Pfam Myb/SANT-like DNA-binding domain 18 108 IPR044822 -
Vian9g01238 261 MobiDBLite consensus disorder prediction 167 189 - -
Vian9g01238 261 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 245 IPR044823 -
Vian9g01238 261 MobiDBLite consensus disorder prediction 120 144 - -
Vian9g01238 261 FunFam Trihelix transcription factor ASIL2 19 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01238 Vian-Chr9 26204117 26204902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01238 19 102 Trihelix Transcription Factor Family AT3G14180 29.762 1.68e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian9g01238 Myb_DNA-bind_4 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01238 - - gmx:100810821 385.956