Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01225 ATGGCACAGGCAGTGGGCCGGAGCAGGTTGGTCGGAGAGTACGTGGTGGGGAGGCAAATCGGCGCGGGGTCGTTCTCGGTGGTGTGGCACGGAAGGCACAAGGTGCACGGAACCGAGGTGGCAATAAAGGAGATCGCCACGCTTCGCCTCAATAAGAAGTTGCAGGAGAGCCTCATGTCCGAAATTTTCATCTTGAAGCGGATTACACACCCTAACATAATCTGTTTGCACGATATCATTCAGGTTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGAGATCTATCCTTGTACATTCAACGCCATGGAAGGGTACCAGAGGCAACTGCAAAGCATTTCATGCTGCAGCTGGCTGCTGGTCTACTAGTTCTTCGAGATAATAACCTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCCCAGAATGATGAGAAGGCAGTACTGAAGATTGCTGACTTTGGATTTGCAAGGTCTCTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTCTATATGGCTCCAGAAATCATGCAACTACAGAAGTATGACGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTGGTTACAGGAAGAACACCTTTTACTGGAAACAATCAAATACAGTTACTACAGAATATATTGAAATCGACAGAATTGCAGTTTCCATCTGATTGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGTTACGTCGGAATCCAGTGGAACGTCTAACTTTCGAAGAATTTTTTAACCACCCATTTCTTTCTCAGAAGCAAAGAGAACAGGATGATGAGCCATTGAGGAGTAGAAGTTCTTCAAGGCTGGTTGGTGGGTTTTTTTCTACAGTGTCTGACCCTTTGAGAAGAACTGAGGAAAATTATCAAGAAGATTGTTTGCCTTTCATCCTAGATGACGACTCTGGTGGCCCCGAGGGGAGTCCATCCTTTTCAAGAAAAAAGTCCTCAATAAAGTCCACCTATGGATTTGATCTAAATTCTAAATTAGATAAAGCAGAATCAACATCTCCTATCTCTAATAACTTCAATTCTAATTCTGGATTTCGTACCATGACACAAAGATCTCAAAACACTAATAGGAGATTGGACAACCGTAACATTTCAAGAAATCTCACTGATCCTCTAGAATCTCCAGAACAGATGTTCGCAAATCCTTATCCAAAAGTTACGGATTCCCTGGAGAATATTGATCAAGAATATGTTCTGGTGCCAGGGCCCCCTATAGATGTTTCATCTTCTTCGGTGGGTGCTTCCAGGCCCAGCCATACCCCATATAGGTCTGGTAGTTTACCTCAAGAGTCTTCTAGTACAATCACCAGACCAAGTGCTCCAATGCCAATAGTTGGTGCACATACAAATAGCATGTACCAAGTTGGAAGTTCAGGAAGTCAGGACTCTGCCCCTGGGACTTCGCTTGGATCGATGGATATAGGTGATGAACAGCCATCAGCTCACTGCATGACCCGGGTAAAATCATTGCAACAGTGTGCATCTGCCATAACCGAGTTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTGGAAGCGTTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCACTGCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAAGAGTGCCAGCAGGAAGCATGGCAGTCCTGATTCAGAAGAATGCCTTGATGGAAACACCCTATGGCCAAAGGATATTTTATCTAAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAGCTTGCCAAGACCATTGAGCCTGGAAGCACTGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGAAGGCATGGGGGTGTAGAAGAACTCATGGGTGACATGGAGAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTGTTAGTTTTTCTTCTAGTGGAAGGACCATCCCTGATTCTTAATCCTCCGTTTTCGCTGACAAACTCAGATCGTTACAGACTTCGAAATTACATTGATATTCTTAATAACAGACAAGGTTATTCAAGGTCCCAGCGAATGGCACTACTGAAATGTGATGACAGTCAAGGTATCCTTAAGGAAAAATTTTAG 2202 0.4382 MAQAVGRSRLVGEYVVGRQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRITHPNIICLHDIIQVPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLLVLRDNNLIHRDLKPQNLLLSQNDEKAVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNILKSTELQFPSDCPSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQREQDDEPLRSRSSSRLVGGFFSTVSDPLRRTEENYQEDCLPFILDDDSGGPEGSPSFSRKKSSIKSTYGFDLNSKLDKAESTSPISNNFNSNSGFRTMTQRSQNTNRRLDNRNISRNLTDPLESPEQMFANPYPKVTDSLENIDQEYVLVPGPPIDVSSSSVGASRPSHTPYRSGSLPQESSSTITRPSAPMPIVGAHTNSMYQVGSSGSQDSAPGTSLGSMDIGDEQPSAHCMTRVKSLQQCASAITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRKSASRKHGSPDSEECLDGNTLWPKDILSKIESEFLREFEHAEELAKTIEPGSTEMPDAMETIFQSALAFGRHGGVEELMGDMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMALLKCDDSQGILKEKF 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01225 733 MobiDBLite consensus disorder prediction 561 593 - -
Vian9g01225 733 MobiDBLite consensus disorder prediction 318 337 - -
Vian9g01225 733 Gene3D Transferase(Phosphotransferase) domain 1 6 311 - -
Vian9g01225 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Vian9g01225 733 MobiDBLite consensus disorder prediction 433 463 - -
Vian9g01225 733 MobiDBLite consensus disorder prediction 575 589 - -
Vian9g01225 733 MobiDBLite consensus disorder prediction 354 403 - -
Vian9g01225 733 CDD STKc_ATG1_ULK_like 20 270 - -
Vian9g01225 733 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01225 733 MobiDBLite consensus disorder prediction 480 503 - -
Vian9g01225 733 FunFam Aurora kinase A 7 96 - -
Vian9g01225 733 MobiDBLite consensus disorder prediction 354 399 - -
Vian9g01225 733 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 642 IPR045269 GO:0004674|GO:0006914
Vian9g01225 733 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Vian9g01225 733 FunFam Serine/threonine-protein kinase ATG1 6 313 - -
Vian9g01225 733 SUPERFAMILY Protein kinase-like (PK-like) 10 464 IPR011009 -
Vian9g01225 733 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01225 733 Pfam Protein kinase domain 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01225 Vian-Chr9 25782324 25799774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01225 10 281 CBL-interacting serine-threonine protein kinases AT2G30360 36.879 1.57e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Vian9g01225 Pkinase 8.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01225 K08269 - gmx:100791596 1309.66