Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian9g01219 | ATGGCCAACCTCAAAATGCTCCTCGTACTCTTGTCTTTGTTGCTGTTCCTTCTGATCCCAGTTTCTTCTCAGCCTAACCAGATCTTCTATGCTGGATTCAAGGGTTTGGATAGCAGCAACATGACCCTTGATGGTGTAGCAGAAATTGAGCCAAGTGGGGTACTGAAACTCACAAATGATTCAAGTAAAGTAATGGGTCATGCTTTTTATCCAACTGCTCTTCAGTTCAAGAACTCAAGTGATGGTAAAGCTTTCTCCTTTTCTTCCTCTTTTGCTTTGGCTATTGTTCCTGAGTTTCCAAAGCTTGGAGGGCATGGCCTTGCTTTTACAATTGCAACTTCCAAGGATCTGAAGGCTCTTCCAAGCCAGTATCTTGGTCTTCTTAACTCAAGTAGCATAGGGAACTTCTCCAACCACCTTTTTGCTGTCGAGTTTGACACAGCCCAAGATTTTGAGTTTGTGGACATCAATGATAACCATGTTGGAATTGACATCAATAGCTTGGTATCCAATGCTTCTGCTCCTGCTGGGTTCTACGCCGGGGATCATGATTCAGACAAACAGAATCTGACTCTCAAAAGTGGGCAACCTATTCTGGTTTGGGTTGATTATGATTCTGCTCAAAGTGTTGTTAATGTCACAATTTCTGCATCTTCTACCAAACCCAGAAGATCACTCTTGTCTTTTCCTGTGGATCTTTCACCAATCCTTAGGGATTCCATGTATGTAGGGTTCTCTGCATCCACAGGGTTGCTTGCTAGCTCCCATTACATTTTGGGTTGGAGCTTCAAAATCAATGGACCAGCAACACCCCTTGATCTCTCTTCCCTCCCACAGCTTCCAGGGCCAAAGAGGAAACACACATCTCTGATAATTGGGGTTTCAGTGTCTGGAGCTGTTCTTGCATTGTTTGCTGTCTTACTCGGCTTCTACATGTACAGAAGGTACAAGAATGCCGATGTTATAGAAGCTTGGGAGCTTGAGATTGGACCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCAACAAAAGGTTTCAAGGACAAAGAGCTGCTTGGACAAGGTGGATTTGGGAGTGTCTACAAGGGAACATTACCAAATTCCAACACCCAAGTTGCTGTCAAGAGAATCTCACATGACTCAAAACAAGGCCTGAGGGAATTTGTGTCAGAAATAGCCAGCATAGGCAGGCTTCGCCACCGGAATCTGGTTCAGCTTCTGGGGTGGTGTCGCCGGCGCGGTGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGGAGCTTAGACAAGTACCTGTTTGATGAACCAGAAATAATCCTTAGTTGGGAGCAAAGGTTTAAGGTGGTGAAGGATGTTGCTTCTGCCCTTTTGTATCTGCATGAGGGCTATGAGCAGGTGGTGATACACAGAGATGTGAAGGCTAGCAATGTGCTGCTAGATGGAGAACTCAATGGAAGACTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGTGCTAACCCAAGTACCACAAGGGTAGTGGGGACATTAGGGTATTTGGCACCTGAGGTGCCTAGGACAGGGAAGGCCACACCTAGCTCAGATGTTTTTGCATTTGGTGCACTTTTACTTGAGGTGGCATGTGGGCTGAGGCCACTTGACCCAAAGGCAATGCCAGAAGATTTGGTTTTGGTTGATTGTGTGTGGAACAAGTACAAGCAAGGGAGAATACTTGATGTGGTGGACCCTAGACTGAATGGTGCTTTTAATGAAAGAGAGGTACTGATGGTGTTGAAATTGGGGCTTCTATGTTCAAATGGTTCTCCCACTGCTAGGCCTAGCATGAGACAGGTGGTGAGGTTCTTGGAGGGAGAAGTTGGTGTGCCAGATGAGTTGAGAAGGCAAGGAGAGACAGATTCTCAGGAGGGTTTTGATGAGTTCTTGCACTTACTTGACTCTTCTTCTTTTCATCAGATGAGCAGAAGCACTTATGGTGGTACTTCTCCTTCTTTTACTGATACATCACTCTTTACTCCCACTGCTAAAGGAGAAACAATGTGA | 2043 | 0.4533 | MANLKMLLVLLSLLLFLLIPVSSQPNQIFYAGFKGLDSSNMTLDGVAEIEPSGVLKLTNDSSKVMGHAFYPTALQFKNSSDGKAFSFSSSFALAIVPEFPKLGGHGLAFTIATSKDLKALPSQYLGLLNSSSIGNFSNHLFAVEFDTAQDFEFVDINDNHVGIDINSLVSNASAPAGFYAGDHDSDKQNLTLKSGQPILVWVDYDSAQSVVNVTISASSTKPRRSLLSFPVDLSPILRDSMYVGFSASTGLLASSHYILGWSFKINGPATPLDLSSLPQLPGPKRKHTSLIIGVSVSGAVLALFAVLLGFYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGSVYKGTLPNSNTQVAVKRISHDSKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPEIILSWEQRFKVVKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGALLLEVACGLRPLDPKAMPEDLVLVDCVWNKYKQGRILDVVDPRLNGAFNEREVLMVLKLGLLCSNGSPTARPSMRQVVRFLEGEVGVPDELRRQGETDSQEGFDEFLHLLDSSSFHQMSRSTYGGTSPSFTDTSLFTPTAKGETM | 680 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian9g01219 | 680 | CDD | lectin_legume_LecRK_Arcelin_ConA | 30 | 267 | IPR001220 | GO:0030246 | |
Vian9g01219 | 680 | Pfam | Protein kinase domain | 346 | 549 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian9g01219 | 680 | FunFam | Lectin-domain containing receptor kinase A4.3 | 331 | 422 | - | - | |
Vian9g01219 | 680 | ProSiteProfiles | Protein kinase domain profile. | 346 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian9g01219 | 680 | SMART | serkin_6 | 346 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian9g01219 | 680 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 422 | - | - | |
Vian9g01219 | 680 | FunFam | L-type lectin-domain containing receptor kinase S.4 | 423 | 629 | - | - | |
Vian9g01219 | 680 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 467 | 479 | IPR008271 | GO:0004672|GO:0006468 | |
Vian9g01219 | 680 | SUPERFAMILY | Protein kinase-like (PK-like) | 328 | 624 | IPR011009 | - | |
Vian9g01219 | 680 | ProSitePatterns | Protein kinases ATP-binding region signature. | 352 | 375 | IPR017441 | GO:0005524 | |
Vian9g01219 | 680 | FunFam | L-type lectin-domain containing receptor kinase S.4 | 24 | 271 | - | - | |
Vian9g01219 | 680 | PANTHER | - | 18 | 623 | - | - | |
Vian9g01219 | 680 | Gene3D | Transferase(Phosphotransferase) domain 1 | 423 | 631 | - | - | |
Vian9g01219 | 680 | Gene3D | - | 27 | 266 | - | - | |
Vian9g01219 | 680 | MobiDBLite | consensus disorder prediction | 653 | 680 | - | - | |
Vian9g01219 | 680 | Pfam | Legume lectin domain | 29 | 277 | IPR001220 | GO:0030246 | |
Vian9g01219 | 680 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 33 | 285 | IPR013320 | - | |
Vian9g01219 | 680 | CDD | STKc_IRAK | 352 | 618 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian9g01219 | Vian-Chr9 | 25618787 | 25620829 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian9g01219 | 21 | 679 | Receptor kinase-like Gene Family | AT3G55550 | 58.136 | 0.0 | 764 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Vian9g01219 | Pkinase | 1.9e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian9g01219 | - | - | gmx:100801247 | 1149.04 |